Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq418590 93.3 6e-13 seq269497 87.8 3e-11 >seq418590 Length=2458 Score = 93.3 bits (102), Expect = 6e-13 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 262914 GCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGAT 262973 ||| ||| ||| |||||| |||| | |||| ||||| ||||| ||||| ||||||| Sbjct 237 GCACGGCGCGCGAAACTCGCTGCTGCTAGCGCCGATGCCAACGGCGTCGACGGCGCAGAT 296 Query 262974 CCTGGGCAACACCGAGGCGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGC 263032 ||| || |||| |||| | |||||| ||| |||| |||||||||||| || |||||| Sbjct 297 CCTCGGAAACAACGAGTCTTTCGAGC-CATACACGTCCAACATCTACACCCGACGCGTGT 355 Query 263033 TCTCGGGCGACTT 263045 | || || || || Sbjct 356 TGTCCGGTGAATT 368 >seq269497 Length=445 Score = 87.8 bits (96), Expect = 3e-11 Identities = 159/232 (69%), Gaps = 18/232 (8%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||| |||||||||| |||||||| ||||| || || |||| || ||| | Sbjct 195 ATCCACAAGGTGCTAAAGCAGGTCCACCCTGACACAGT-----CATC-TCTTCGAAGGCG 248 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| |||||| | |||| | | Sbjct 249 ATGAGCATCATGAACAGCTTCGTCAACGACATTTTCGAGAGCATCGCCGCCGAACCTAGC 308 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| || |||||| ||| || | ||||||||||||||||| ||| Sbjct 309 CGTCTGGCGC---ACATCAAGCGGTCGACGCTCACGATTCGCGAGATCCAGACCGCAGTG 365 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| ||| || || ||| |||||||||| |||||| |||| Sbjct 366 C---------TGCCCGGTGAGCTCGCCGAGCACGCCGTCAGCGAGGGGACCA 408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7136096648131542