Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq391541 129 6e-25 seq340006 109 6e-19 seq298504 95.1 1e-14 seq432080 84.2 2e-11 seq37324 82.4 8e-11 >seq391541 Length=1171 Score = 129 bits (142), Expect = 6e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| |||| || ||||| || | ||| || || || |||||||| ||||||||||| Sbjct 1086 TCCACCTCGCAGACGCAAAACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGA 1027 Query 134546 AACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || || || | || || || ||||| || || || |||| |||||| |||||||| | Sbjct 1026 AAGAGTTCTGCCA-TCCTCCAGTTGTTTTCCAGCGAAGATCAGACGCTGTTGATCGGGGG 968 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| ||||| || || || || || | | ||| || | ||| | Sbjct 967 GGATTCCCTCTTTGTCTTGGATCTTGGCCTTAACATTCTCGATCGAGTCAGAAGCTTCGA 908 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTT 134719 | || || |||||||| ||||| || | |||||||||||||||||||| ||||| Sbjct 907 CCTCTAGGGTAATGGTCTTACCCGTGAGGGTTTTAACGAAAATTTGCATCTTGTT 853 >seq340006 Length=671 Score = 109 bits (120), Expect = 6e-19 Identities = 174/246 (71%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | ||| || | || | ||| || || |||||||| || ||||||||||| | | Sbjct 51 CCTCCACGGAGCCGAAGGACCAAGTGGAGTGTCGATTCCTTCTGGATGTTGTAGTCAGAC 110 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | ||| || ||||| || || ||||| ||||| ||||||||||| || || Sbjct 111 AATGTTC-GTCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCGCTGCTGATCTGGGGG 169 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||| || || | | || || | ||| || Sbjct 170 GATTCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTCTCAATCGAATCAGAAGCTTCTAC 229 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTTTTTGT 134724 || || || || || || || || || || || |||||||| ||||| |||||| ||| Sbjct 230 CTCAAGGGTGATTGTCTTCCCTGTCAATGTCTTCACGAAAATCTGCATGGTTGTTTCTGT 289 Query 134725 TCAACG 134730 |||| Sbjct 290 AGAACG 295 >seq298504 Length=516 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GC 134544 ||| || | ||| | |||||| || || || || ||||| ||||| ||||||||||| | Sbjct 276 TCCACCACGGAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGA 217 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| | || || | ||| || || || || || | ||||||||||| || | Sbjct 216 CAA-GGTACGGCCATCTTCCAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTG 158 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || ||||| ||||| ||| || || | || |||||| | || | Sbjct 157 GAATTCCTTCCTTGTCTTGGATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTA 98 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || ||||| || || || | || || || || || ||||| Sbjct 97 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTTACAAATATCTGCAT 49 >seq432080 Length=12955 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || ||||||||| |||| ||| | || || || || || || |||||||| || ||| | Sbjct 9577 CAGCACATGCTGATGCGTGTGTCAGTCGGTATCCATGGGGAGGACATTGATGCTGCCATT 9636 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||| | || | || | | | || |||||||| || ||||| |||| | Sbjct 9637 GAGACTTACAACCTGCTATCGGAGCGATATTTCACGCACGCGTCACCCACGCTGTTCAGC 9696 Query 7684 GCGGGCACAAACGCG-CCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 || | || |||| || || | ||| || || |||| | ||| |||||||||| Sbjct 9697 GCCGCAACGC-CGCGACCACAGCTCTCCAGCTGCTTCCTGCTGGCAATGAGCGAAGACAG 9755 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAA 7790 |||||| || || ||| |||| ||| | | |||||| ||||| || Sbjct 9756 CATCGAAGGGATCTACGACACTCTGAGGCAGTGCGCCCTCATTTCAAA 9803 >seq37324 Length=216 Score = 82.4 bits (90), Expect = 8e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | |||||| | || | ||| || || ||||||||||| |||||||||||| Sbjct 130 CCTCCACGGAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 71 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || | ||| || || ||||| ||||| |||||||| || || || Sbjct 70 AATGTACGACCATCTTCCAACTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGG 11 Query 134607 ATGCCTTCTT 134616 || ||||||| Sbjct 10 ATACCTTCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502666146757320