Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq358794 95.1 1e-14 seq429159 84.2 2e-11 >seq358794 Length=784 Score = 95.1 bits (104), Expect = 1e-14 Identities = 250/379 (66%), Gaps = 2/379 (1%) Strand=Plus/Minus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924 ||||||| | || ||||| ||||| || |||| | | |||| ||| ||| ||| | Sbjct 387 AGGTGATTTAGGCCCTGTCTATGGCTTCCAGTGGAGGCATTATGGGGCACTGTATTCAAA 328 Query 40925 TATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGAT 40984 ||| || | |||| || ||||| || ||| | | || ||| || | Sbjct 327 CATGCACGCAAATTACGCCGGGCTCGGAATCGACCAACTGAAAGAAGTGATAACAACTTT 268 Query 40985 TAAATC-CGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTAC 41043 ||||| ||| || ||| || || || || |||| || ||||| || ||| | | Sbjct 267 GAAATCTCGA-CCGGATGATCGTCGAATCATCATGTGTGCATGGAATCCCGTCGACATCC 209 Query 41044 ATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAAC 41103 |||||| | || || || |||| | |||||| |||||| |||| | | Sbjct 208 CGAAGATGGCTCTTCCGCCGTGCCATTGCCTTGTTCAGTTCTACGTTGCTGATGGAAAGC 149 Query 41104 TGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAG 41163 | || || ||| |||| ||| | || | |||||||| || || | ||||||||||| | Sbjct 148 TCTCCTGCCAACTGTACCAACGGTCGGCAGACATGGGTCTTGGCATTCCGTTTAACATTG 89 Query 41164 CGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAAT 41223 | || ||||| ||||| ||||| ||||| || || || || | || |||||||| | Sbjct 88 CCAGCTATGCACTGCTTACGTACATGATCGCCCATGTCACAGGATACAAGCCTGGTGACT 29 Query 41224 TTGTTCACACGTTAGGAGA 41242 |||| || || |||| || Sbjct 28 TTGTACATACACTAGGTGA 10 >seq429159 Length=5605 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 || || || || || || || || |||||||| ||||| ||||| |||||||| |||| Sbjct 4526 TTCGTAGTTTTCCCCATCCAGTACCATGACATCTGGCATATGTATAAAAAAGCTGAGGCC 4467 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGG 43810 || || ||||| || ||||||||||||||| | || || | || ||||| Sbjct 4466 TCCTTCTGGACGGCTGAAGAAGTTGATTTGTCCAAGGATATGGCTGATTGG 4416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395361015758455