Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq429159 89.7 6e-13 >seq429159 Length=5605 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/197 (72%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 94746 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGCGTTCCTTTGCT 94803 |||| ||||| || |||||||| | |||||| | || || | ||| || || | Sbjct 3899 TCAAGAAGAAGGCCGATTGGGCGCTCAAGTGGATCTGTCACGA-GTCTGCATCTTTCGGC 3841 Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GC 94862 |||||| || |||| ||||| ||| ||||| || |||||||||||| || ||| || Sbjct 3840 GAGCGAATCATCGCCTTTGCCGCTGTCGAGGGGATTTTCTTCTCTGGTAGTTT-TGCTGC 3782 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 |||| ||||| ||||||||||| || |||||||| | ||| ||| || || || Sbjct 3781 CATTTTCTGGCTGAAGAAGCGAGGGCTTATGCCAGGCTTGACTTTCAGCAATGAACTGAT 3722 Query 94923 CTCTCGTGACGAGGGAC 94939 || ||||| |||| || Sbjct 3721 TTCACGTGATGAGGTAC 3705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580107611916840