Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq430330 288 3e-72 seq382479 268 3e-66 seq298504 176 1e-38 seq340006 159 1e-33 seq391541 150 5e-31 seq385119 127 6e-24 seq419427 114 4e-20 seq54643 104 7e-17 seq428957 102 2e-16 seq407459 98.7 3e-15 seq37324 93.3 1e-13 seq429457 89.7 2e-12 >seq430330 Length=6849 Score = 288 bits (318), Expect = 3e-72 Identities = 788/1200 (66%), Gaps = 14/1200 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || |||||||| || || ||||||| || |||||| | | | Sbjct 4283 GCGATTGGTATCGACTTGGGTACTACCTACTCCTGTGTTGGAGTGTGGCAACAAGGAAGA 4342 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || |||||||| || || |||||||| ||||||| || || || ||||| | Sbjct 4343 GTGGAGATAATTGCCAACGACCAAGGTAATCGAACAACTCCCAGCTATGTCGCATTCAGT 4402 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | || | | || || ||| |||| || ||||| | || ||||| || || Sbjct 4403 GATAACGAAAGGCTAATCGGAGATGCTGCCAAGAATCAGGTGGCAATGAATCCCAAGAAC 4462 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || ||||| ||||| || ||||| |||||||| || ||| |||| | | || Sbjct 4463 ACAGTTTTCGATGCAAAACGACTCATTGGTAGGAGATTTGATGACTACAAAATTCAGGAG 4522 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || || ||||| | || || || || | || | Sbjct 4523 GACATGAAGCACTGGCCATTCACGGTTGTCGAAGTTGAAGGA---AAGCCTAAAATCCAA 4579 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 | ||||| ||||| || || ||| | || |||||||| || |||||| | Sbjct 4580 GCTGAATTCAAAGGAGAGTTGAAGAGATTCTCGCCAGAAGAAATCAGCTCGATGGTTCTT 4639 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 | ||||||||||| | |||||| || ||| |||| || | || |||||||| || || Sbjct 4640 TTGAAAATGAAGGAGACTGCTGAGGCTTATCTAGGAGACAAGGTGACTGATGCAGTCATC 4699 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 |||||||| || |||||||| ||| | ||||| || || ||||| ||||| |||| Sbjct 4700 ACTGTACCTGCATATTTTAACGATTCTCAGCGACAGGCGACTAAAGACGCTGGTTCCATT 4759 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | || || || |||| || |||||||| |||||||| ||| | || |||||| Sbjct 4760 GCTGGTCTGAACGTCCTTCGAATCATCAATGAACCAACTGCTGCTGCATTGGCTTATGGG 4819 Query 349739 CTTGATAAAATGAGT-GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 | || || | ||| | ||||| |||| || | || || ||| | || || || || Sbjct 4820 TTGGACAAGA-AAGTCAAAGGAGAAAGAAATGTTTTAATCTTCGATCTTGGCGGAGGCAC 4878 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCAACTGC 349854 |||||||| || | || ||| |||| || ||| | || || || ||||| ||||| Sbjct 4879 CTTTGATGTTTCCATTCTCACAATTGATGAAGGATCCTTGTTCGAGGTAAAAGCTACTGC 4938 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||| || || ||| | |||||||| ||||| || |||||||| || | ||| | | | | Sbjct 4939 TGGAGACACTCATTTAGGTGGAGAGGATTTCGACAATCGTCTTGTAACTCATCTGGCTGA 4998 Query 349915 AGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 ||||| ||| || | | || ||| | ||||| | || |||| || || Sbjct 4999 CGAATTCAAGAAGAAATACAGCAAAGACATTCGCACCAATCCGCGTGCTCTGCGGCGGCT 5058 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 | ||||| ||| || || ||||| | | || |||| ||| || | || || Sbjct 5059 GCGTACTGCAGCTGAGCGAGCAAAGCGCACACTCTCCTCTAGTACTGAAGCTAGCATCGA 5118 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 | ||||| | ||| ||||| || | || | | | || || || ||||| Sbjct 5119 AGTTGATGCCCTTTTCGATGGAGTGGACTACTACACGAAAGTGTCCCGGGCGCGTTTTGA 5178 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || || ||| |||||||||| ||| | | ||||| | || | ||| || Sbjct 5179 GGAGTTGTGTGCCGATCTTTTTAACAACACACTTGCACCTGTAAAGAAGGCATTGGTCGA 5238 Query 350155 TGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 || || ||| |||| ||| |||| ||||| || || || || || || ||||| Sbjct 5239 CGCCAAGATGGACAAAGGAGCGATCCATGATGTAGTCTTGGTGGGAGGATCAACTCGTAT 5298 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT---TCTAGATC 350271 ||||||||| || | || ||||||| ||| |||| || ||| | Sbjct 5299 TCCAAAAGTACAGAGCCTGCTCGAAAAGTTTTTCTGTGG-AAAGGCGCTGAATCT--CAC 5355 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 ||| || || || || || || ||||| || || ||||| || ||| |||| | ||| Sbjct 5356 AATCAACCCTGACGAGGCCGTAGCATACGGAGCAGCTGTACAAGCAGCTATAATCAGTGG 5415 Query 350332 AAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 | | | ||||| |||| | ||| || | | ||||||| | |||||||| || || Sbjct 5416 AGACACCAGTTCAGCAATTCAGGATGTACTTTTGGTAGATGTCGCACCACTTTCCCTGGG 5475 >seq382479 Length=1021 Score = 268 bits (296), Expect = 3e-66 Identities = 614/911 (67%), Gaps = 24/911 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAA-AATGATCG 349257 || || || || ||||| || || || ||||| ||||||| |||| ||| || || | Sbjct 995 GCAATTGGGATTGATTTGGGCACCACCTATTCCTGTGTTGGAGTTTTTCAACAAGGAAAG 936 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 || ||||| || || ||||| |||||||| |||| || ||| | ||||| || | Sbjct 935 -GTGGAAATCATCGCTAATGACCAAGGTAATCGAACGACTCCAAGTTTTGTTGCCTTCAG 877 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || || |||||| | ||||| ||| |||| || || |||| ||| ||||||||||| Sbjct 876 TGACACCGAGCGTCTCATTGGCGATGCTGCCAAGAACCAAGTTGCCATGAATCCAAAAAA 817 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAA 349435 ||| |||||||||| || || || |||||| | | ||| ||| | || | || | Sbjct 816 TACTATTTTTGATGCCAAACGCCTCATTGGTCGCCGATTTGATGATTCCAAGATTCA--A 759 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 ||||| | || |||| || || ||||| | ||| || | || || |||| | Sbjct 758 GCTGATATGAAGCATTGGCCATTCACTGTGAT--CAATAGTGGAGGA-AAGCCAAAACTA 702 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | | |||| || || || || |||| || ||||| || || |||||| Sbjct 701 CAAGCAGAATTCAAGGGAGAGTTGAAGACCTTTTCCCCAGAAGAGATCAGCTCTATGGTT 642 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || ||||||||||| |||| || ||||||| | | || || ||| | ||||| || Sbjct 641 TTGGTTAAAATGAAAGAAACGGCCGAAGCATTTCTGGGCACAAAAGTGAAGGATGCAGTC 582 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 ||||| ||||||||||| || |||||| |||| || || || || ||||| || Sbjct 581 ATTACGGTACCAGCCTACTTCAATGATTCCCAACGGCAAGCTACGAAGGATGCAGGGGCA 522 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || || ||||| || ||||| |||| || || ||||| || ||||| || | |||||| Sbjct 521 ATCGCAGGGTTGAACGTTCTCCGAATCATCAACGAACCAACAGCTGCTGCTCTGGCATAT 462 Query 349736 GGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || | ||| | |||| ||| ||||||| ||||| || || || Sbjct 461 GGTCTGGACAAGAACCTGA---AAGGAGAACGCAATGTTCTTATCTTTGACTTGGGAGGA 405 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCA 349849 || || || ||||| || | || || | || || ||| | ||||||||| ||| Sbjct 404 GGAACCTTCGATGTGTCCATTCTTACCATCGACGAAGGATCTCTGTTTGAAGTTCGAGCC 345 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATT-- 349907 |||||||| || || || |||||||| || || || || || ||||| | | |||| Sbjct 344 ACTGCTGGAGACACTCACCTTGGTGGTGAGGACTTCGACAACCGTCTAG--TAACATTCC 287 Query 349908 TTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGC 349967 | | | ||||| ||| | || | | | || || || |||||| |||| || Sbjct 286 TGGCCGATGAATTCAAGAGAAAATATCACAAGGACATCAAAGGCAATCCTCGAGCCTTGA 227 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 | | || || ||||| ||| |||||||||||| | | || || | || | || Sbjct 226 GAAGACTGAGGACTGCAGCTGAGCGTGCTAAGCGTACACTTTCTTCGAGCACAGAGGCCA 167 Query 350028 CTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086 |||||||| || | | |||| ||||| |||| || || || | |||||| Sbjct 166 GCATTGAAATCGACGC-CCTGCTCGATGGTGTGGATTACTACTCGAAGATATCTCGTGCT 108 Query 350087 CGGTTTGAAGA 350097 || |||||||| Sbjct 107 CGCTTTGAAGA 97 >seq298504 Length=516 Score = 176 bits (194), Expect = 1e-38 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | || | |||||||| || ||||| |||||||| || || || ||||| Sbjct 275 CCACCACGGAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAC 216 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 || || || |||||||| | || ||||| || ||||| || || |||||||| || ||| Sbjct 215 AAGGTACGGCCATCTTCCAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTGGA 156 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||||||| || || || ||||| ||||| ||||| ||||| || || |||| || || Sbjct 155 ATTCCTTCCTTGTCTTGGATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTACC 96 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || |||||||| |||||||| Sbjct 95 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTTACAAATATCTGCAT 49 >seq340006 Length=671 Score = 159 bits (176), Expect = 1e-33 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || | || || || || || || || || || || || Sbjct 47 CATACCTCCACGGAGCCGAAGGACCAAGTGGAGTGTCGATTCCTTCTGGATGTTGTAGTC 106 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| |||||||| || || ||||| || ||||| |||||||| | || |||||||| || Sbjct 107 AGACAATGTTCGTCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCGCTGCTGATCTGG 166 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || |||||||| || || || || || ||||| || || |||||||||||||| | ||| Sbjct 167 GGGGATTCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTCTCAATCGAATCAGAAGCTTC 226 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | |||||| || || | ||| || || ||||||||||| Sbjct 227 TACCTCAAGGGTGATTGTCTTCCCTGTCAATGTCTTCACGAAAATCTGCAT 277 >seq391541 Length=1171 Score = 150 bits (166), Expect = 5e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || ||||| ||||| || || || ||||| | |||| ||||| || | Sbjct 1065 CAAG-TGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCCA 1007 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 ||||||||||||| ||||| ||||| || ||||| || || ||||| ||||| || || | Sbjct 1006 GTTGTTTTCCAGCGAAGATCAGACGCTGTTGATCGGGGGGGATTCCCTCTTTGTCTTGGA 947 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| || ||||| ||||| | ||| || || || |||| ||||| | Sbjct 946 TCTTGGCCTTAACATTCTCGATCGAGTCAGAAGCTTCGACCTCTAGGGTAATGGTCTTAC 887 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || ||||| || ||||| ||||| Sbjct 886 CCGTGAGGGTTTTAACGAAAATTTGCAT 859 >seq385119 Length=1061 Score = 127 bits (140), Expect = 6e-24 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 140593 GTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTT 140652 |||| || || ||||| |||||||||||||| || || |||||||| ||||| ||||| | Sbjct 1 GTTTGCCTGCGAAGATAAGACGTTGCTGATCTGGGGGGATTCCTTCCTTATCTTGAATCT 60 Query 140653 TAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGG 140712 |||| || ||||| |||||||| || || | ||||||||||| || | ||||| || | Sbjct 61 TAGCCTTGACATTCTCAATCGAGTCTGAAGCCTCAACTTCAAGGGTGATGGTCTTCCCCG 120 Query 140713 TTAGTGTTTTTACAAAAATCTGCAT 140737 | | ||| || ||||| || ||||| Sbjct 121 TCAATGTCTTCACAAAGATTTGCAT 145 >seq419427 Length=2563 Score = 114 bits (126), Expect = 4e-20 Identities = 423/654 (65%), Gaps = 24/654 (4%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCC-ATCATACGTTGCATTTAC 349317 || || || || || || ||||||||| |||||||||| || | | | || || || | Sbjct 2532 GTGGAGATTATCGCCAACGATCAAGGTCACAGAACAACTCCCAGCGTG-GTGGCGTTCAA 2474 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 ||| |||| | ||||| || || ||||||| || |||||||| || |||| || Sbjct 2473 CGAGTTTGAGAGGATGATCGGCAATGCTGCAAAGAACCAAGCTGCAATGAACGCAAAGAA 2414 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTA-CA--CA 349434 || | ||| | || || || || || || |||| ||| ||| | | | || || Sbjct 2413 CACTATCTTTAACGCCAAACGCCTGATCGGACGAAGGTTT---GACGACCCGAACATCCA 2357 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | || |||| || | || |||||||| || | | |||| | ||| | || Sbjct 2356 AGAAGACATAAAGCAATGGCCATTTACTGTCGT---AGACAACGGAGGTAAGCTGATGGC 2300 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | | | | || || | |||| ||| |||| |||||||| | |||||| | Sbjct 2299 CCAAGCGATGTGCATGGGAGAGCTAAAAGCATTCCTACCTGAAGAAATATGTTCAATGAT 2240 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | | | |||| |||| || ||||| ||| | |||| ||| || || || || Sbjct 2239 ACTGGGATATTTGAAAGAAACCGCCGAAGCTTATCTTGGTGGGGAAGTCACGGAAGCCGT 2180 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | |||||||||| || |||||||| || ||| | || | ||||| |||| Sbjct 2179 TGTTACTGTACCGGCATATTTTAACGACCAACAGAGGCAAGCGATTTTGGATGCAGGCAA 2120 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 || || || | ||| |||| | || || || || || || || ||||| ||||||| Sbjct 2119 GATCGCTGGACTGAATATTCTTCGTATAATCAACGAGCCAACGGCAGCAGCTCTTGCATA 2060 Query 349735 TGGGCTTGATAAA--ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || |||||| | || || ||| ||| || |||| ||||| || ||| Sbjct 2059 CGGACTGGATAAAGAAGGATTGCGCAA--------TATCCTGATTTACGATTTGGGAGGT 2008 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT--TTTGAAGTTAAAG-CA 349849 || || | ||||| || | || | || || | || | | ||| | || | | Sbjct 2007 GGAACACTGGATGTTTCTGTCCTGTCCATTAAATATGGTACTGATTTCACTGTATTGGCC 1948 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG 349903 || ||||| || ||||| |||||||||||||| ||||| || | || |||||| Sbjct 1947 ACAGCTGGAGACACACACCTTGGTGGAGAAGACTTTGACAACAGGCTTGTTTCG 1894 >seq54643 Length=225 Score = 104 bits (114), Expect = 7e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || ||||| || || || || |||||||| ||||| || || || || || || || ||| Sbjct 3 CGCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATC 62 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 || ||||| | |||||||||||||||| ||||| ||||| || || || ||||| ||| Sbjct 63 GAGTCAGAAGCCTCAACTTCAAGTGTAATGGTCTTGCCGGTCAGAGTCTTCACAAAGATC 122 Query 140733 TGCAT 140737 ||||| Sbjct 123 TGCAT 127 >seq428957 Length=5445 Score = 102 bits (112), Expect = 2e-16 Identities = 123/164 (75%), Gaps = 5/164 (3%) Strand=Plus/Minus Query 349248 AAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACG 349307 |||||| || || || |||||||| ||||| || |||||| ||| ||| || || || | Sbjct 2173 AAAATGGGCGAGTGGAGATAATTGCTAATGACCAGGGTAACCGAATAACCCCCTCGTATG 2114 Query 349308 TTGCATTTAC---CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CT 349363 | || || || ||| |||||| ||||||||||| |||| |||||||| |||| || Sbjct 2113 TCGCCTTCACTCCCGACGGTGAGCGATTGATTGGTGATGCTGCTAAAAATCA-GCTGACT 2055 Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGG 349407 || || || | || || || || ||||||||||| | ||||| Sbjct 2054 GCCAACCCCGAGAACACAGTATTCGATGCTAAGCGTTTAATTGG 2011 >seq407459 Length=1649 Score = 98.7 bits (108), Expect = 3e-15 Identities = 80/96 (83%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| |||||||| ||||| |||||||| ||||| ||||| | ||||| ||||||| Sbjct 95 GACCAAG-TGAAGAGTGGACTCCTTTTGAATGTTATAGTCAGAAAGAGTTCGGCCATCTT 37 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || ||||| || || ||||| ||||||||||||| Sbjct 36 CCAGCTGTTTGCCTGCGAAGATAAGACGTTGCTGAT 1 >seq37324 Length=216 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | || || || | || |||||||| || ||||| || || || || Sbjct 134 CATACCTCCACGGAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTC 75 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || ||||| || |||||||| | || |||||||||||||| | || ||||| || || Sbjct 74 GGACAATGTACGACCATCTTCCAACTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGG 15 Query 140627 AGGAATTCCTTCTT 140640 || || ||||||| Sbjct 14 GGGGATACCTTCTT 1 >seq429457 Length=5870 Score = 89.7 bits (98), Expect = 2e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 54777 ATCCACCAACAAATTGTTCAGCTGGAGTAATAGATGATGATATTTTTCATTGGCAAGCAA 54836 ||||||| | | ||||| || ||| | | | ||| ||| | ||||| |||||||| | Sbjct 914 ATCCACCTGCTCAGTGTTCTGCAGGACCAGTGGGTGAGGATTTGTTTCACTGGCAAGCCA 973 Query 54837 CAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATT 54896 | || ||||| ||| ||| | ||| ||||||||||| | || || | ||| ||| Sbjct 974 CGATCATGGGCCCACCAGACAGCCCATATCAAGGTGGCGTGTTCTTCTTGAACATTCATT 1033 Query 54897 TTCCACAAGATTATCCATTTAAACCTCCAAATGTAGTTTTTACTACAAAGATTTATCAT 54955 |||| |||||||| ||||| ||||| || || | || || || | ||| |||||| Sbjct 1034 TTCCGACTGATTATCCGTTTAAGCCTCCTAAGGTGGCATTCACAACCAGGATCTATCAT 1092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1506857934525273