Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq358794 129 5e-25 >seq358794 Length=784 Score = 129 bits (142), Expect = 5e-25 Identities = 230/336 (68%), Gaps = 0/336 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| |||||||||||||| ||||| || || || |||||||| ||||| | || | Sbjct 51 GACATGGGCGATCATGTACGTAAGCAGTGCATAGCTGGCAATGTTAAACGGAATGCCAAG 110 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||||||| |||| ||||| || || |||||||| |||| |||| || |||||||| Sbjct 111 ACCCATGTCTGCCGACCGTTGGTACAGTTGGCAGGAGAGCTTTCCATCAGCAACGTAGAA 170 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 || ||| |||||||| || || |||||| |||| || || ||||| || Sbjct 171 CTGAACAAGGCAATGGCACGGCGGAAGAGCCATCTTCGGGATGTCGACGGGATTCCATGC 230 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAG 6855 ||||| | ||| | | ||||| || ||||| || ||||| | | ||| Sbjct 231 ACACATGATGATTCGACGATCATCCGGTCGAGATTTCAAAGTTGTTATCACTTCTTTCAG 290 Query 6856 CTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTG 6915 ||||| ||| | || | || | || | | |||| |||||| | || Sbjct 291 TTGGTCGATTCCGAGCCCGGCGTAATTTGCGTGCATGTTTGAATACAGTGCCCCATAATG 350 Query 6916 TCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 ||||||||||| || ||||| ||||| || || || Sbjct 351 CCTCCACTGGAAGCCATAGACAGGGCCTAAATCACC 386 Score = 129 bits (142), Expect = 5e-25 Identities = 230/336 (68%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || || || ||||| ||||| || ||||||||||| || | |||||| |||| Sbjct 386 GGTGATTTAGGCCCTGTCTATGGCTTCCAGTGGAGGCATTATGGGGCACTGTATTCAAAC 327 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTG 34513 | | || | || | || | ||| ||||| ||| | | ||||| || ||| Sbjct 326 ATGCACGCAAATTACGCCGGGCTCGGAATCGACCAACTGAAAGAAGTGATAACAACTTTG 267 Query 34514 AAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCT 34573 || || ||||| | | ||| | ||||| || ||||| || || |||| Sbjct 266 AAATCTCGACCGGATGATCGTCGAATCATCATGTGTGCATGGAATCCCGTCGACATCCCG 207 Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTG 34633 |||||| || || |||||||| ||| || |||||||| || |||| |||| Sbjct 206 AAGATGGCTCTTCCGCCGTGCCATTGCCTTGTTCAGTTCTACGTTGCTGATGGAAAGCTC 147 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 |||||||| || || ||||| |||| ||||||||| | || | ||||| |||||||| Sbjct 146 TCCTGCCAACTGTACCAACGGTCGGCAGACATGGGTCTTGGCATTCCGTTTAACATTGCC 87 Query 34694 AGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || || || ||||| |||||||||||||| |||||| Sbjct 86 AGCTATGCACTGCTTACGTACATGATCGCCCATGTC 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445839031829520