Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq391541 109 4e-19 >seq391541 Length=1171 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| ||||||||||||||||||||||| || || || || || || || || | Sbjct 856 AAGATGCAAATTTTCGTTAAAACCCTCACGGGTAAGACCATTACCCTAGAGGTCGAAGCT 915 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||| | | || ||| |||| | || | | |||||||| || | || || || Sbjct 916 TCTGACTCGATCGAGAATGTTAAGGCCAAGA-TCCAAGACAAAGAGGGAATCCCCCCCGA 974 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||||||| | || || || || ||||||||||| || | | ||| | || || Sbjct 975 TCAACAGCGTCTGATCTTCGCTGGAAAACAACTGGAGGATGGCAGAACTCTTTCTGACTA 1034 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||||| ||||| ||||| || | || || ||||| | ||||||| ||| Sbjct 1035 CAACATCCAAAAGGAGTCGACCCTGCACTTGGTTTTGCGTCTGCGAGGTGGA 1086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 336227956785428