Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq358794 131 1e-25 >seq358794 Length=784 Score = 131 bits (144), Expect = 1e-25 Identities = 175/238 (74%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 29681 TCTCCCAGGGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTA 29739 || || || || || ||||| || || || || || || | |||| || || |||||||| Sbjct 10 TCACCTAGTGTATGTACAAAGTCACCAGGCTTGTATCCTG-TGACATGGGCGATCATGTA 68 Query 29740 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCT 29799 ||| || || | |||||||| |||||||| || | || || |||||||| | |||| Sbjct 69 CGTAAGCAGTGCATAGCTGGCAATGTTAAACGGAATGCCAAGACCCATGTCTGCCGACCG 128 Query 29800 CTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGC-ATGGC 29858 ||||| || ||||| ||||||| ||| || ||||| |||||| ||| ||| ||||| Sbjct 129 TTGGTACAGTTGGCAGGAGAGCTTTCCATCAGCAACGTAGAACTGA-ACAAGGCAATGGC 187 Query 29859 ACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCG 29916 |||| ||||| ||||| | ||| ||| ||||| ||||||| |||||| || Sbjct 188 ACGGCGGAAGAGCCATCTTCGGGATGTCGACGGGATTCCATGCACACATGATGATTCG 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404022320246026