Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq429159 95.1 2e-14 >seq429159 Length=5605 Score = 95.1 bits (104), Expect = 2e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680 ||||| || || | ||| ||||||||||| ||||| || || ||||| |||||||||||| Sbjct 4426 ATATCCTTGGACAAATCAACTTCTTCAGCCGTCCAGAAGGAGGCCTCAGCTTTTTTATAC 4485 Query 48681 ATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 |||| ||| || ||| ||| ||||| ||||||| || || | |||||||| Sbjct 4486 ATATGCCAGATGTCATGGTACTGGATGGGGAAAACTACGAAGCGTCGTGGATTTT 4540 Score = 86.0 bits (94), Expect = 9e-12 Identities = 131/186 (70%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| || || || || || ||||| || || || || ||| ||||| ||||| Sbjct 3746 CCTGGCATAAGCCCTCGCTTCTTCAGCCAGAAAATGGCAGCAAAACTACCAGAGAAGAAA 3805 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--- 48317 || || || || || ||||| ||| | | || ||| ||| || || | ||| Sbjct 3806 ATCCCCTCGACAGCGGCAAAGGCGATGATTCGCTCGCCGAAAGATGCAGACTCGTGACAG 3865 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 |||||| | |||||||| ||||||||||| ||||| ||||| || || ||||| || Sbjct 3866 ATCCACTTGAGCGCCCAATCGGCCTTCTTCTTGACACATGGCATCGTCTCCATAGCGTTG 3925 Query 48378 AAGAGA 48383 || ||| Sbjct 3926 AACAGA 3931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690913324950240