Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 533 2e-146
seq1346 123 3e-23
>seq1251
Length=5235866
Score = 533 bits (590), Expect = 2e-146
Identities = 1197/1778 (67%), Gaps = 34/1778 (2%)
Strand=Plus/Minus
Query 52798 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 52857
||| |||| ||| |||||||| | | || || || || || |||||||| ||||||||
Sbjct 3096377 CTTATCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATAATACATTCC 3096318
Query 52858 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGG 52917
||||| ||||| | |||| | ||||| || ||| |||||||| |||| | ||
Sbjct 3096317 AGTTTTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCCATAATTTGG 3096258
Query 52918 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 52977
|| |||| ||| ||||| | || || |||||||| ||||| || || |||||||| ||
Sbjct 3096257 CTCAGCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCTGTCTGCCGC 3096198
Query 52978 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 53036
||||| ||| | || || || ||| ||||||| |||||| || || || |||| |||
Sbjct 3096197 CATTTGAATGGTAGTTTTGACTGAAATCTCCCAAACAGTTTTGTACAAGTCTCTTA-TAT 3096139
Query 53037 CTTCTGGAA-GGTTTG--TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
||| |||| ||||| |||| ||||| |||||| || ||||| ||| || |
Sbjct 3096138 CTTTGGGAATGGTTTCAATATTTTGAATTGATCCATTATTATGAATAATGAGATTTTTCA 3096079
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153
| || |||| ||||| | || |||||| | | | | || |||| || ||||
Sbjct 3096078 TATCTTCATCCCATAGCTCAGCTTCTGTTAAATCACGCAATAAGTGATGATTGACAACTT 3096019
Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213
| |||||||| || ||||| | | |||||||||| || | || || | ||| |
Sbjct 3096018 GGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGCTCAAAAGATT 3095959
Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273
|||| ||||| | ||||| || ||||| ||||| |||||||| || || | || ||
Sbjct 3095958 CATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACTAGTAGTGAAT 3095899
Query 53274 TTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 53331
| | ||| || ||||| || ||||| ||||| | | | ||| | ||| || || |
Sbjct 3095898 TGCGAAGTCC--ATGTTTTGCAATTTTGTCTTTCAATGCCTGCCAGTCCCAGAGGTCTGT 3095841
Query 53332 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 53390
|| ||||| || || | |||| | | || | | | ||
Sbjct 3095840 TGGAGTTTTGTTCCACATCTCATATTGTAATATCCCCTGACTGACAGGACTACCATG-AT 3095782
Query 53391 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 53450
|||| || || || | || || || | ||||||||| |||||||| || |||||||
Sbjct 3095781 ATGTCTCATACACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAAT 3095722
Query 53451 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGG-AT 53507
|||| ||||| || || | | || || | || || || || ||| |||| ||
Sbjct 3095721 AAATAGTTTCAAATATTTGTTGGTTCAGTTTGATAGCAGTTTCA--CTTTCATATGGTAT 3095664
Query 53508 AAT--TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565
|||| | || | | |||||||||||||| ||||| || || |||||||| ||
Sbjct 3095663 GCGCATTAATACAA---ATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTG 3095607
Query 53566 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 53625
||| |||| || ||| ||||| || | ||||| ||||| | ||| |||||||||||
Sbjct 3095606 CCTCATATTTGATTTTTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATT 3095547
Query 53626 GAGGTTTCTGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATTGTC- 53681
|| || | || || ||||| || || || |||||| ||| | || || |
Sbjct 3095546 TAGATTCTGGGTAACTATCTTTGTG-ACCTCTTTAAGTTTGGTAAAGTTGTAAGTTTTGT 3095488
Query 53682 CATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741
|||| | |||||||||||||| ||||||||||| | |||||||| ||| |||| |
Sbjct 3095487 CATCATTCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTG 3095428
Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801
|| | ||| | | || || ||||| | || ||||| || || || |||| |||||
Sbjct 3095427 CAGATGTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTT 3095368
Query 53802 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861
||||||||||| | ||||| |||||||| || | || |||| || |||||||| |
Sbjct 3095367 TCTGATTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTA 3095308
Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATT--TGTATCT 53919
|| | ||| ||||| |||||||| | | | || || | | | || || |
Sbjct 3095307 CTTGTGCTTCAATAATAGCTTTCCACAGTATCTGTGCTTTGA--CTTGTTTCACATAACG 3095250
Query 53920 CTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAA 53979
||||| ||| ||| | |||||| |||||||| || ||||| || | | ||
Sbjct 3095249 TTTTTCCTGTTCATATTTTTCATACAAAGCCTCAAACTCTTCACCCCAGCAATCGGCTAA 3095190
Query 53980 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 54039
|| ||| | |||| || ||||| | ||| ||| | | | | || ||||||||
Sbjct 3095189 ACCTGGAGAATCATGAGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTTCAT 3095130
Query 54040 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 54099
||| | ||| |||||||| || || ||| || ||||| | | |||||| || ||
Sbjct 3095129 AAATAAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACC 3095070
Query 54100 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 54159
||||||||| | ||| || ||| | | ||||||| |||||| ||||| || || |
Sbjct 3095069 ATGATTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACAC 3095010
Query 54160 GGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 54219
| | | | || |||||||| || || || || || | ||||| || |||||||| ||
Sbjct 3095009 TGCGAAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGTA 3094950
Query 54220 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 54279
||| | |||||| || | |||||||| || ||||||| || || | || ||| | ||
Sbjct 3094949 AACACGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGCC 3094890
Query 54280 ACTGGCACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337
|||| | ||| | | | | ||| | ||| || || || || ||||||||| ||
Sbjct 3094889 TTTGGCTCTAATGCAGTGC-ACATGA-ACACCAATACCACCAGCTGATTTAGAGATCAAA 3094832
Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397
|| || |||| || || ||||| || ||||| || || ||||| |||| || |||
Sbjct 3094831 GCACACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAGA 3094772
Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457
||||| ||||| || | | | || | ||| ||| | || ||| || ||
Sbjct 3094771 AAACATGAAGACAACTGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATGA 3094712
Query 54458 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGA 54517
|| || |||| ||||| | || |||||| |||| || || | || | ||| |
Sbjct 3094711 GTGAAATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCACCA 3094652
Query 54518 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 54555
|| ||||| | | || | ||||||||| ||||| ||
Sbjct 3094651 TGTATTCCGATAGAAACTCTCATTAACATATGCTGCGG 3094614
>seq1346
Length=947742
Score = 123 bits (136), Expect = 3e-23
Identities = 109/135 (81%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672
|| || |||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 446676 TGTTACCTTT-GATAAATCCACTTCTTCCACCGTCCAAAATGATGCCTCTGCCTTCTTAT 446734
Query 24673 ACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTG 24732
|||| ||||| ||||| |||| ||||| || || || ||||||| |||| || |
Sbjct 446735 ACATTTTCCATATGTCGGGATACTGAATGGGGAATATTACAAATCGTCTTGGGTTGTCCC 446794
Query 24733 CAAGGATTGGTTCCA 24747
||| | ||||||||
Sbjct 446795 GAAGCAATGGTTCCA 446809
Score = 96.9 bits (106), Expect = 4e-15
Identities = 157/225 (70%), Gaps = 7/225 (3%)
Strand=Plus/Plus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| |||||| ||| | ||| ||| || || || || ||||| || || | ||| |
Sbjct 445068 CCTCATCTCTAGAAATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTTCT 445127
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| || ||||| || || || || ||||| || ||||| ||||| ||||| |
Sbjct 445128 TCAGCCAGAAGATGGAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGCAAAAG 445187
Query 24277 CAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT-----ATCCACTTTTGAGCCCAATC 24331
| | || || ||||||| | ||| ||| || ||||||| ||||| ||
Sbjct 445188 CCACAATTCGTTCTCCAAATGTGGCA--GTCTTGCTGGCGATCCACTGCAATGCCCAGTC 445245
Query 24332 GGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376
||||||||| || || || |||| ||||| || ||||| || ||
Sbjct 445246 GGCCTTCTTCTTCACGCAGGGCAGGGTCTCAATGGCATTGAACAG 445290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593667415482480
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