Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq1527 275 5e-69
seq1207 107 2e-18
seq1196 100 2e-16
seq1889 91.5 1e-13
>seq1527
Length=671880
Score = 275 bits (304), Expect = 5e-69
Identities = 756/1143 (66%), Gaps = 34/1143 (3%)
Strand=Plus/Plus
Query 105456 GAAAACGTACGACGCTTGAGCGGCGCTGTCAAACGTGTACACATAATTG--TTGAG--AT 105511
||||||||| | |||||| ||| || |||| | |||| | | ||| ||||| ||
Sbjct 503578 GAAAACGTAAGGCGCTTGGGCGACGTTGTCGTAATGGTACTCCCATTTGCCTTGAGCTAT 503637
Query 105512 CTT-TTTG-AATTTGACGATAATCTACAACACCGTCCTCCCACGTGCCCGACCCCGGCCC 105569
|| |||| ||| | | |||||| || ||||| || | ||| | || | || ||
Sbjct 503638 CTCATTTGCAATGTCTCTATAATCAACGACACCATCTTGCCAAGAACCTTTGCAGGGACC 503697
Query 105570 GTTGCCAGTGCCGGAAAA---ATAGTTGTCATTCGTATAATTTGTTACGCCGGTCCAGCC 105626
|| || | || | ||| || |||||| || || || || || ||||| ||
Sbjct 503698 TGTGGCATTACCAGTAAATGGATTGTTGTCT---GTGTAGTTCTGAACTCCTGTCCAACC 503754
Query 105627 GCGGCCGTACATGGCGACGCCCACAATTATTTTGTTGGGATCGACGCCTTGTTTCAG-TA 105685
||||||||||| || ||||| || ||||| || || || | ||||| || || ||
Sbjct 503755 ACGGCCGTACATAGCTACGCCGACTATTATCTTCTTCGGGTTCACGCCCTG----AGCTA 503810
Query 105686 AC--GCATCGA-CAGCGTAGTGTGTAGTGTATAGCTCTTCCGAGTTCCAACTTGGCGCGT 105742
|| | || | | || | | ||| ||||| ||| | | ||||| |||||||
Sbjct 503811 ACAGGTATTTAACTCCGAAATCTGTCGTGTAAGTCTCCTTTGGTTTCCACGCAGGCGCGT 503870
Query 105743 AGACTGTTGTTTGGTAGCCCAAATCCGTGTTTGACCAAGCCCCTTTAAAATCGTAACTCA 105802
| | || ||| |||| ||||||| ||| ||||| || ||||| || || |||||||
Sbjct 503871 ACAGTGATGTCTGGTGGCCCAAAGTGTCGTTCGACCAGGCTCCTTTGAAGTCATAACTCA 503930
Query 105803 TGAGAAATATTTTGCCTAATGACTTTTGCGCTTCGGCGTAGTTTACCACGGCAATCTTGT 105862
||| || || | | | | || || ||||| |||||| ||||| || ||||
Sbjct 503931 TGAAGAAAATGTGATCCATGTATTTCTGGGCTTCTTTGTAGTTCACCACTTGGATTTTGT 503990
Query 105863 CGTAACCCGCGCTTATAGCGCTTGTTAATTCGTAAACCCTGCCGGTTTGCGCTTCGAGGT 105922
| |||| ||||| || || || | || || | | || |||| ||| || |
Sbjct 503991 CCCAACCGGCGCTGATGGCTGAAGTCAGCTCATATTTCTTTCCAGTTTCAGCTGACAGCT 504050
Query 105923 CGTCTAGCATTGCGCGCAGCTCCTCCAACAACAAAATGTATGTTTTGGCGTCACCGTCC- 105981
| | | |||| | || || || | || | | | | |||| | ||||| |||
Sbjct 504051 CATTCAACATTTCACGAAGTTCTTTCATAAGCGACACGTATA------CATCACCATCCT 504104
Query 105982 --GCATCGCCCAACGACGGGTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTA 106039
| | ||| | ||||| || ||||||||||| || |||||||| |||||||| |
Sbjct 504105 TGGGACTGCCAAGGTTAGGGTTGGCACCTTTGCCGCCAGGGAACTCCCAGTCGATGTCAA 504164
Query 106040 CACCGTCAAAGAATTTCCACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGTTTC 106099
||||||| ||||| ||||| | || || ||||| || ||| ||||||| || ||
Sbjct 504165 CACCGTCGAAGAACTTCCAGGTCTCGAGGAAGTCCTTCACTGAAGCTACAAATCGGTCTC 504224
Query 106100 TTTTTTCAACATC-GTGCATAAAATAAAATGGGTCTGATAGAGTCCAGCCTCCTATTGAA 106158
| || || ||| | || | | || || || | | |||||| || || || |||
Sbjct 504225 TCTTAGACTTGTCAGTGAAGAAGA-AGAAGGGATCAGCCAAAGTCCACCCACCGATGGAA 504283
Query 106159 GGAAGAATTTTTAAATGGGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCT 106218
|| | ||||| | | ||| || ||| ||| | ||||||||||||||| ||||||
Sbjct 504284 GGCAAGATTTTCATGTCGGGTTTAGCTTGTTTCAACATCATCAACTGTCCAAAGTTGCCT 504343
Query 106219 TTATACGGCTCGTTCCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGA 106278
|| || || |||||||| | |||| || || || || || || | |||||||||||
Sbjct 504344 TTGTAAGGTTCGTTCCATGAAGACAATCCCTTCTGTGGCTTCTGGAGAGCGGCCCACGGG 504403
Query 106279 TCGTGAATGGCAACTTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAG 106338
|||||||| | ||| ||||| ||||| || || ||||||||| |||||||| || ||
Sbjct 504404 TCGTGAATCGAAACCTTGAAGTCTTCCCGGCCACTGCACGATCGTTGCAAAGCTTGGAAA 504463
Query 106339 CTTCCGGGTATCGTTTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAA 106398
|| || || ||| | |||||| || ||||| || || || || || |||||
Sbjct 504464 CTGCCTTCGATTTCTTTCAAACTGTCGTTGATCCCATCACCTCCACAAATTGGGATGAAT 504523
Query 106399 CCATACAACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCG 106458
|| |||| ||| || | ||||| || | || || ||| || || || || | |
Sbjct 504524 CCGTACAGCAAATGGGTCAAATTCGGGATTGGCACACGGTCAACTGGGAACTTCCTCGGA 504583
Query 106459 TACACACCCCACTCAACAAAGTACGCAGCGACAATTTTATC--CTCTCT-CCTGCCAGGT 106515
|| ||||||||||| || || || || | || | |||| | ||| | || |||
Sbjct 504584 TATACACCCCACTCGACGAAATATGCGCCCACCACTTTACCGGACGTCTGCTTGAACGGT 504643
Query 106516 TTGTTGTTTTCCAGCCATGTGTATTCGAGCGGTGCCAGATGGCCGCCGTCGGTGTCTGCG 106575
|| || |||| || | | || ||||||| ||||||| ||||| || || ||
Sbjct 504644 TTATTTCTTTCTCCGATTGAGAAGTCTAGCGGTGGGAGATGGCTACCGTCAGTATCGGCT 504703
Query 106576 ACT 106578
|||
Sbjct 504704 ACT 504706
>seq1207
Length=6027761
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| |||| |||||||| || |||||||| ||| ||| || || ||
Sbjct 2996457 ATGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCA 2996398
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || ||||| |||||| || || ||||| | || ||| ||
Sbjct 2996397 GACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCTCCAGACCAG 2996338
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| || | ||||| || ||||| || |||||||| || | |||||||||||
Sbjct 2996337 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGATGGACGCACGCTTTCCGATTACAAT 2996278
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170
||||| |||||||||||||||||| ||||
Sbjct 2996277 ATTCAAAAGGAATCTACTCTTCACTTGGT 2996249
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
||||||||| || || | || ||||||||||| || || |||||| ||| || ||
Sbjct 2996689 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 2996630
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| || || | | || |||| || ||| |||||||| || | || ||
Sbjct 2996629 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 2996570
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGAT 29135
||| || |||| ||||| || ||||| || ||||||| | | ||||| |||||
Sbjct 2996569 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTAT--CCGAT 2996512
Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|||||||||||||| |||||||| ||||| |||| || ||
Sbjct 2996511 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCG 2996471
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
||||||||| || || | || ||||||||||| || || |||||| ||| || ||
Sbjct 2998255 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 2998196
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| || || | | || |||| || ||| |||||||| || | || ||
Sbjct 2998195 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 2998136
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGAT 29135
||| || |||| ||||| || ||||| || ||||||| | | ||||| |||||
Sbjct 2998135 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTAT--CCGAT 2998078
Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|||||||||||||| |||||||| ||||| |||| || ||
Sbjct 2998077 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCG 2998037
>seq1196
Length=1288689
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
|||||| || ||| | |||||| | ||||| || ||||| ||| || |||| | |
Sbjct 730403 AATGCAGATCTTCGTAAAAACACTTACGGGGAAGACCATCACCCTTGAGGTGGAAGCTTC 730344
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || | || |||||| ||||| |||||| | || || ||
Sbjct 730343 TGACACCATCGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCTCCGGACCA 730284
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|| |||||||||| || |||||||||||||||||| | || || | || |||||
Sbjct 730283 GCAGCGACTTATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACATTGTCAGACTACAA 730224
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||| ||||| || || | ||| ||||| || |||| |||||||
Sbjct 730223 TATTCAAAAGGAGTCCACCTTGCACTTGGTGCTAAGATTGAGAGGAGG 730176
>seq1889
Length=140810
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
||||||||| || || | || ||||||||||| || || |||||| ||| || ||
Sbjct 27459 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 27518
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| || || | | || |||| || ||| |||||||| || | || ||
Sbjct 27519 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 27578
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGAT 29135
||| || |||| ||||| || ||||| || ||||||| | | ||||| |||||
Sbjct 27579 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTAT--CCGAT 27636
Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|||||||||||||| |||||||| ||||| |||| || ||
Sbjct 27637 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCG 27677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428297886261155
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