Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1527 192 6e-44 seq1346 161 1e-34 seq1207 138 1e-27 seq1196 132 5e-26 seq1889 89.7 5e-13 seq2599 84.2 2e-11 >seq1527 Length=671880 Score = 192 bits (212), Expect = 6e-44 Identities = 355/516 (69%), Gaps = 10/516 (2%) Strand=Plus/Plus Query 65531 GGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAGTCCACGTCCAGGCCGTCGAACAGCTTC 65590 |||||||| || |||||||| || ||||||||||| | ||| | |||||||| | |||| Sbjct 504122 GGGTTGGCACCTTTGCCGCCAGGGAACTCCCAGTCGATGTCAACACCGTCGAAGAACTTC 504181 Query 65591 CACGTCTGCAGAAACTcgcgcgccgactcgacgaacgcgcggcgcgcgct----cgcgTC 65646 || |||| || || || | | || | || || ||| | | || | ||| Sbjct 504182 CAGGTCTCGAGGAAGTCCTTCACTGAAGCTACAAAT---CGGT-CTCTCTTAGACTTGTC 504237 Query 65647 -GTGCATGTGATAAAACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCA 65705 ||| | || | || ||||| | || ||||| || |||||||| |||| | || Sbjct 504238 AGTGAAGAAGA-AGAAGGGATCAGCCAAAGTCCACCCACCGATGGAAGGCAAGATTTTCA 504296 Query 65706 GGTGCGGGTGCGCCTTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGC 65765 || || | || | || | ||||| ||| || |||||||| ||||| || ||| Sbjct 504297 TGTCGGGTTTAGCTTGTTTCAACATCATCAACTGTCCAAAGTTGCCTTTGTAAGGTTCGT 504356 Query 65766 TCCACGCGGTCACGCCCTTTTGCGGCTTCTGCACGGCCGCCCACGGGTCGTGCACCGCCA 65825 |||| | | || ||||| || |||||||| | || |||||||||||||| | || | Sbjct 504357 TCCATGAAGACAATCCCTTCTGTGGCTTCTGGAGAGCGGCCCACGGGTCGTGAATCGAAA 504416 Query 65826 GCTTGAAGTCGTCGCGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGG 65885 ||||||||| || ||||| |||||| || |||| || | ||| ||||| |||| Sbjct 504417 CCTTGAAGTCTTCCCGGCCACTGCACGATCGTTGCAAAGCTTGGAAACTGCCTTCGATTT 504476 Query 65886 ACTTGAGGCTGTCGTTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGAT 65945 || | ||||||||||| || || || || || || || | ||| |||||||||| || Sbjct 504477 CTTTCAAACTGTCGTTGATCCCATCACCTCCACAAATTGGGATGAATCCGTACAGCAAAT 504536 Query 65946 GCGTGAGGTTGGGCACGGGCACCTTGTCGGCGGGAAAGTCGCGCCCGTACACGCCCCACT 66005 | || | || || | ||||| ||| | || || | | | || || ||||||| Sbjct 504537 GGGTCAAATTCGGGATTGGCACACGGTCAACTGGGAACTTCCTCGGATATACACCCCACT 504596 Query 66006 CGACGAAGTAGGCGGCCACCACCTTGCCGGTCGGCT 66041 ||||||| || ||| ||||||| || |||| || || Sbjct 504597 CGACGAAATATGCGCCCACCACTTTACCGGACGTCT 504632 >seq1346 Length=947742 Score = 161 bits (178), Expect = 1e-34 Identities = 171/223 (77%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005 |||| || ||||| ||||| |||| ||||| || |||||||||| ||||| ||| | Sbjct 445289 TGTTCAATGCCATTGAGACCCTGCCCTGCGTGAAGAAGAAGGCCGACTGGGCATTGCAGT 445230 Query 117006 GGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAG 117064 |||||||| ||| ||| ||| | || || || || | ||||| || || || ||||| Sbjct 445229 GGATCGCCAGCA-AGACTGCCACATTTGGAGAACGAATTGTGGCTTTTGCAGCAGTCGAA 445171 Query 117065 GGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATG 117124 ||| ||||||| |||||||||||||| |||| || ||||| ||||| | || |||||| Sbjct 445170 GGCATCTTCTTCTCGGGCAGTTTCGCTTCCATCTTCTGGCTGAAGAAGAGGGGGCTCATG 445111 Query 117125 CCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 || || || ||||||||||| || || || || || || |||| Sbjct 445110 CCTGGGCTTACTTTCAGCAATGAACTGATTTCTAGAGATGAGG 445068 Score = 105 bits (116), Expect = 7e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 117165 AGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCG 117224 ||||||| || |||||||| || || |||||||||||||||| || |||||| Sbjct 444678 AGGGTCTTCACACAGACTTTGCTTGCCTGATGTTCAAGCATTTGGTACAAAAGCCGAGCA 444619 Query 117225 CGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284 || || || | ||||| | | || || || | || |||||| || ||||| | Sbjct 444618 AGGAGCATGTGCTGAAGATCATTAAAGATGCAGTGGTGATTGAGCAGGAGTTTCTCACAG 444559 Query 117285 AAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGT 117344 | || ||||| || |||||||| || | || || || ||||||| | ||||| |||| Sbjct 444558 ACGCCCTGCCTGTTCGTCTGCTCGGCATGAACTGTGACTTGATGTCGGAGTACATAGAGT 444499 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCT 117372 | || || |||||||||||| | || || Sbjct 444498 TTGTGGCTGACAGGCTGCTGGTAGATCT 444471 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 116724 TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACG 116783 |||| ||| ||| || ||||||||||| || ||||| || |||||||| || || | Sbjct 446454 TGAAAGACTGCGAACGACATTTCATCAAACATGTGCTTGCATTTTTCGCAGCGTCAGATG 446395 Query 116784 GCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGC 116843 | || ||||| || || || || || | ||| | || ||||| || ||| | || || Sbjct 446394 GAATAGTCAATGAAAACCTAGTAGAAAGATTCTCACAAGAGGTCCAAGTGACAGAAGCTA 446335 Query 116844 GGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCC 116903 | | || || || || ||||| || ||||| || || || || || ||||| || | Sbjct 446334 GATTTTTTTATGGGTTCCAGATTGCTATGGAAAATGTACATTCTGAGATGTACTCCTTAC 446275 Query 116904 TCATCGACACGTA 116916 | || ||||| || Sbjct 446274 TTATTGACACATA 446262 >seq1207 Length=6027761 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || || |||||||||||| | || || || |||| | Sbjct 2998023 ATGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGA-GCCATC 2997965 Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| | |||| ||||||| ||||| || ||||| ||| | ||||| Sbjct 2997964 AGACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 2997905 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||| |||| |||| ||||| || ||||||||| Sbjct 2997904 GCAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACGCTTTCCGACTACAA 2997845 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| || |||||| | || || ||| |||| || || ||||| || || Sbjct 2997844 CATTCAAAAGGAGTCTACTCTACATTTAGTATTACGTTTGAGAGGTGG 2997797 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||||||||| ||||| || ||||||||||| | || || || | | Sbjct 3527978 ATGCAGATCTTCGTAAAAACTCTCACTGGGAAAACCATCACACTTGAAGTGGAGCCTTCA 3527919 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | |||||||| ||||||||||| || ||| | |||||| Sbjct 3527918 GACACCATTGAGAATGTCAAAGCAAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3527859 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| || |||| || | |||||| | ||||||||| Sbjct 3527858 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTACAAC 3527799 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || |||||||| Sbjct 3527798 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3527770 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| ||||| ||||| || ||||||||||| | || || ||| | | Sbjct 3526154 ATGCAGATATTCGTCAAAACTCTCACTGGAAAAACCATCACACTAGAAGTAGAACCATCT 3526095 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | ||||||| ||||||||||| || ||| | |||||| Sbjct 3526094 GACACAATAGAAAATGTCAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3526035 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| || |||| || | |||||| | ||||| ||| Sbjct 3526034 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTATAAC 3525975 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || |||||||| Sbjct 3525974 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3525946 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| ||||| ||||| || ||||||||||| | || || ||| | | Sbjct 3527294 ATGCAGATATTCGTCAAAACTCTCACTGGAAAAACCATCACACTAGAAGTAGAACCATCT 3527235 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | || | ||||||| ||||||||||| || ||| | |||||| Sbjct 3527234 GACACAATAGAAAATGTTAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3527175 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| || |||| || | |||||| | ||||||||| Sbjct 3527174 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTACAAC 3527115 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || |||||||| Sbjct 3527114 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3527086 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || ||||||||||| | || || ||| | | Sbjct 3525926 ATGCAGATTTTTGTTAAGACCCTCACTGGAAAAACCATCACACTTGAAGTGGAACCTTCT 3525867 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | || | ||||||| ||||||||||| || ||| | |||||| Sbjct 3525866 GACACCATCGAGAATGTTAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3525807 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| ||||| ||| |||| || | ||||| ||| ||||| || Sbjct 3525806 CAGCGTTTGATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACTCTCTCAGACTATAAT 3525747 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| |||||| | || || || | ||| |||||||| | || ||| Sbjct 3525746 ATCCAAAAGGAGTCAACCCTTCACTTGGTGCTGCGCTTGCGTGGTGGC 3525699 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| | || || ||| | | Sbjct 3526610 ATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAAGTGGAACCTTCT 3526551 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | ||||| || ||||||||| | ||||| Sbjct 3526550 GACACAATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAA 3526491 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| || |||| || | |||||| | ||||||||| Sbjct 3526490 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTACAAC 3526431 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || |||||||| Sbjct 3526430 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3526402 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| | || || ||| | | Sbjct 3526838 ATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAAGTGGAACCTTCT 3526779 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | ||||| || ||||||||| | ||||| Sbjct 3526778 GACACAATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAA 3526719 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| || |||| || | |||||| | ||||||||| Sbjct 3526718 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTACAAC 3526659 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || |||||||| Sbjct 3526658 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3526630 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| | || || ||| | | Sbjct 3527066 ATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAAGTGGAACCTTCT 3527007 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | ||||| || ||||||||| | ||||| Sbjct 3527006 GACACAATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAA 3526947 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| || |||| || | |||||| | ||||||||| Sbjct 3526946 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTACAAC 3526887 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || |||||||| Sbjct 3526886 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3526858 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| | || || ||| | | Sbjct 3527750 ATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAAGTGGAACCTTCT 3527691 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | ||||| || ||||||||| | ||||| Sbjct 3527690 GACACAATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAA 3527631 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| || |||| || | |||||| | ||||||||| Sbjct 3527630 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTACAAC 3527571 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || |||||||| Sbjct 3527570 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3527542 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || ||||| ||||| | || || || | | Sbjct 3527522 ATGCAGATCTTCGTTAAAACTCTTACTGGGAAAACTATCACACTTGAAGTTGAGCCTTCT 3527463 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||| | || |||| || |||||||| || ||| | |||||| Sbjct 3527462 GACACCATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAGGGAATTCCCCCAGACCAG 3527403 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || || || ||| |||| || | ||||| ||| ||||| ||| Sbjct 3527402 CAGCGTTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTCTCAGACTATAAC 3527343 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| | || || || | |||||||| Sbjct 3527342 ATCCAGAAGGAATCGACTCTTCACTTGGTGTTGCG 3527308 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 |||||||| ||||| || || | || || |||||||||||| | || || | ||||| | Sbjct 2996457 ATGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAG-AGCCATC 2996399 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| | |||| ||||||| ||||| || ||||| || | ||||| Sbjct 2996398 AGACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCTCCAGACCA 2996339 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||| |||| || | ||||| || ||| ||||| Sbjct 2996338 GCAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGATGGACGCACGCTTTCCGATTACAA 2996279 Query 40869 CATCCAGAAGGA 40880 || || ||||| Sbjct 2996278 TATTCAAAAGGA 2996267 >seq1196 Length=1288689 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||||||||| || ||||| || ||||||||| | || || ||||| | Sbjct 730403 AATGCAGATCTTCGTAAAAACACTTACGGGGAAGACCATCACCCTTGAGGTGGAAGCTTC 730344 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||| | || | ||||||| || || || || ||||| ||||||| Sbjct 730343 TGACACCATCGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCTCCGGACCA 730284 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||||| |||| ||| |||||||| ||||| || | ||||| | |||||||| Sbjct 730283 GCAGCGACTTATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACATTGTCAGACTACAA 730224 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || |||||| |||| |||| | ||| | | ||||| || || Sbjct 730223 TATTCAAAAGGAGTCCACCTTGCACTTGGTGCTAAGATTGAGAGGAGG 730176 >seq1889 Length=140810 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 |||||||| ||||| || || | || || |||||||||||| | || || | ||||| | Sbjct 27691 ATGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAG-AGCCATC 27749 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| | |||| ||||||| ||||| || ||||| ||| | ||||| Sbjct 27750 AGACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 27809 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGA 40844 ||| ||| | |||| ||| ||||| ||| |||| || Sbjct 27810 GCAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGA 27845 >seq2599 Length=163288 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 139584 ACAGCATCATCGGACGGAGTCTGGTCGTGCACACGGACAGGGACGATCTGGGCCTCACCG 139643 ||||||| ||||| || | ||| || || ||| ||||| ||||| |||||||| || Sbjct 61092 ACAGCATAATCGGGCGCACTCTAGTTGTTCACGCGGACCCCGACGACATGGGCCTCGGCG 61033 Query 139644 ACCATCCATTGAGCAAGACCACCGGCAACTCGGGCGGCCGGCTCGCGTGCGGCATCATCG 139703 ||| ||||||||||||| |||||| | || | || ||||||||||| |||||| Sbjct 61032 GCCACGAGCTGAGCAAGACCACGGGCAACGCCGGGGCTCGCATCGCGTGCGGCGTCATCG 60973 Query 139704 G 139704 | Sbjct 60972 G 60972 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 |||||| |||||||||||||||||||| ||| | ||||| ||||| ||||| || | Sbjct 63476 GCACGGTTTCCACGTGCACGAGTTCGGGGACAACACAAACGGCTGCACCTCGGCGGGGGC 63417 Query 139438 GCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCACGTCGG 139497 |||||||||||| | |||||||| || || || || | || ||| | || Sbjct 63416 TCACTTCAACCCCCTGAAGAATGACCACGGAGCACCAGATGCTACAGTGAGACACATTGG 63357 Query 139498 CGACCTGGGCAACCTCGAG 139516 ||||| |||||| ||||| Sbjct 63356 AGACCTTGGCAACATCGAG 63338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515172179807760