Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1527 244 1e-59 seq2980 125 8e-24 seq1435 122 1e-22 seq1196 118 1e-21 seq1251 116 4e-21 seq1528 104 3e-17 seq1207 104 3e-17 seq1184 104 3e-17 seq1974 100 3e-16 seq1562 100 3e-16 seq1337 100 3e-16 seq1170 100 3e-16 seq2176 98.7 1e-15 seq1917 98.7 1e-15 seq1497 98.7 1e-15 seq1459 98.7 1e-15 seq1168 98.7 1e-15 >seq1527 Length=671880 Score = 244 bits (270), Expect = 1e-59 Identities = 800/1231 (65%), Gaps = 43/1231 (3%) Strand=Plus/Minus Query 96454 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTA--CGATCGTAAGTTTCCCGCGG 96511 |||||| ||| || ||||| || || ||||| || || ||| | ||||| || | | Sbjct 504621 AAAGTGGTGGGCGCATATTTCGTCGAGTGGGGTGTATATCCGA--GGAAGTTCCCAGTTG 504564 Query 96512 ACAAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAG 96571 || ||||| || || ||| |||| ||| | ||||||| || || || ||||| |||| Sbjct 504563 ACCGTGTGCCAATCCCGAATTTGACCCATTTGCTGTACGGATTCATCCCAATTTGTGGAG 504504 Query 96572 GCGACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAAT 96631 | || || |||||||||||| | ||| | | ||| ||| | ||||| ||| || Sbjct 504503 GTGATGGGATCAACGACAGTTTGAAAGAAATCGAAGGCAGTTTCCAAGCTTTGCAACGAT 504444 Query 96632 CATGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAA 96691 | || ||| | || || ||||||||| || |||||| | | ||||| || | Sbjct 504443 CGTGCAGTGGCCGGGAAGACTTCAAGGTTTCGATTCACGACCCGTGGGCCGCTCTCCAGA 504384 Query 96692 AACCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCA 96751 | || || || || | || || || ||||||||| ||||| ||||| ||| | | Sbjct 504383 AGCCACAGAAGGGATTGTCTTCATGGAACGAACCTTACAAAGGCAACTTTGGACAGTTGA 504324 Query 96752 TGGCTATTCGCAAACA---TAACCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGA 96808 || || ||||| ||| || | | ||||| |||||| ||||||||| |||| Sbjct 504323 TG---ATGTTGAAACAAGCTAAACCCGACATGAAAATCTTGCCTTCCATCGGTGGGTGGA 504267 Query 96809 CACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACT 96868 | || || || |||| || ||| | ||| | | ||| || | |||||| | | Sbjct 504266 CTTTGGCTGATCCCTTCTTCTTCTTCACTGACAAGTCTAAGAGAGACCGATTTGTAGCTT 504207 Query 96869 CGGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGT 96928 | || || ||| | | |||||||| ||||| || || |||||||||||||||| Sbjct 504206 CAGTGAAGGACTTCCTCGAGACCTGGAAGTTCTTCGACGGTGTTGACATCGACTGGGAGT 504147 Query 96929 TTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACAT 96988 | || ||||| || ||||||||||| || | ||| ||| | |||||| | || Sbjct 504146 TCCCTGGCGGCAAAGGTGCCAACCCTAACCTTGGCAGTCC---CAAGGATGGTGATGTAT 504090 Query 96989 ATGTAACACTATTGAAAGAACTACGCCTAATGCTAGACAAACTG---GGTG----TGGTG 97041 | || | || |||||||||| || |||| | | | ||| | || ||| Sbjct 504089 ACGTGTCGCTTATGAAAGAACTTCGTGAAATGTTGAATGAGCTGTCAGCTGAAACTGG-A 504031 Query 97042 AACAAACGCGTGTACGAGTTGACCAGCGCCGTGGGAGCAGGCTACGATAAAATAGACGTG 97101 || ||| || ||| |||| ||| | | || || | || ||||| | ||| Sbjct 504030 AAGAAA------TATGAGCTGACTTCAGCCATCAGCGCCGGTTGGGACAAAATCCAAGTG 503977 Query 97102 ATAGATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTC 97161 | | ||| || |||| ||||||| | || || |||||||| |||||| Sbjct 503976 GTGAACTACAAAGAAGCCCAGAAATACATGGATCACATTTTCTTCATGAGTTATGACTTC 503917 Query 97162 AAAGGCGCATGGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGG 97221 ||||| || ||||| ||| |||||| || || ||| || ||||||| ||| ||||| Sbjct 503916 AAAGGAGCCTGGTCGAACGACACTTTGGGCCACCAGACATCACTGTACGCGCCTGCGTGG 503857 Query 97222 AACCCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTCAAGCAAAAAGT- 97280 || || | || | ||||| || || | | || ||| | ||| | || || Sbjct 503856 AAACCAAAGGAGACTTACACGACAGATTTCGGAGTTAAATACCTGTTAGCTCAGGGCGTG 503797 Query 97281 -ACCTTCCAACAAAATTGTAGTTGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGC 97339 ||| | || || || |||| || || || ||||||||| | || |||| || || | Sbjct 503796 AACC--CGAAGAAGATAATAGTCGGCGTAGCTATGTACGGCCGTGGTTGGACAGGAGTTC 503739 Query 97340 ACGATTACAAGAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACAT 97399 | | |||| |||| || |||||| || ||||||||||| |||||| | | Sbjct 503738 AGAACTACACAGACAACAATCCATTTACTGGTAATGCCACAGGTCCCTGCAAAGGTTCTT 503679 Query 97400 GGGAAAACGGTGTCGTCGATTATAGGCAAGTT---AACGATTTTAAAAACAGTCCCGCTT 97456 || || | |||||||| |||||||| | || || || | | || | | Sbjct 503678 GGCAAGATGGTGTCGTTGATTATAGAGACATTGCAAATGAGAT--AGCTCAAGGCAAATG 503621 Query 97457 ACACTTACGCTTACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGAAGAGG 97516 | ||| ||||||||| || ||| | ||||| ||||||| | || | || | Sbjct 503620 GGA-GTACCATTACGACAACGTCGCCCAAGCGCCTTACGTTT---TCAGACC---AGCGA 503568 Query 97517 CGTTGGATCTGATTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGT 97576 | || |||| ||||||| || | || || | | || || | || ||| Sbjct 503567 CTGGAGACTTGATAACTTACGATGATGCCAGATCAGTCATTGAGAAGGGGAAGTATGTGA 503508 Query 97577 TACAGAATAATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGACAATGGCGATTTGT 97636 | ||||| ||||||||| | || || |||||||||||||| |||||||||||| | Sbjct 503507 GAAGTAATAAGTTAGGTGGTCTATTCGCTTGGGAAATAGATGCGGACAATGGCGATATAC 503448 Query 97637 TAAACGCCATGAACACAGGTCTGGGCAACAG 97667 | || || ||||| | || || || || || Sbjct 503447 TCAATGCAATGAATATGGGCCTAGGGAATAG 503417 >seq2980 Length=17643 Score = 125 bits (138), Expect = 8e-24 Identities = 98/116 (84%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 60047 AACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAG 60106 || || ||| |||||| ||||| |||| ||||||||||||| ||||||||||||||||| Sbjct 8203 AATGTATATAAAAAATAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAG 8262 Query 60107 GCGGACATACTCACCACTATACTACCGAGGATTGAATATATAACTTGAATATTACA 60162 |||| ||||| ||||||||||||||||||||| |||| || |||| |||||| Sbjct 8263 GCGGGGATACTTACCACTATACTACCGAGGATTTAATAACAAATGTGAA-ATTACA 8317 >seq1435 Length=863250 Score = 122 bits (134), Expect = 1e-22 Identities = 192/275 (70%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 14672 AACGATTACATAATATCGGCCACGTATTTTGAAGGGAAAAAAGTGCATTACAACATTGGC 14731 |||||||| ||||||||||| ||||| ||| | ||||| | | ||||| ||||| Sbjct 802952 AACGATTATATAATATCGGCAACGTACTTTAATTTCAAAAAGATAAAATACAATATTGGT 802893 Query 14732 TTATTTTACTATGTATTGTGGAGTATATGCAGTGGCAAGGAGTGGATGGATAAAAATGTG 14791 ||||| || ||| || | |||| | || | || || |||||||||| |||||| Sbjct 802892 TTATTCTATTATATACTATGGAAGAATTGTGATAATAAAGAATGGATGGATAGAAATGTT 802833 Query 14792 GCTGCCCAATTCCTGAAGTACGTCAAACGTCGCATCGAAATTACAACATGCAAGCTTGGA 14851 | || || || ||||||||| | | || || |||| ||| ||| |||| Sbjct 802832 GTTGAGCATTTTAAGAAGTACGTAATGAGACGTATTAGTGATACAGTATGTAAGATTGGT 802773 Query 14852 CTCTCGTCTCTTCCCCTGGACCCACAAATGAATACGTCACTGCTGACCGCATTATGGTAC 14911 ||||| || | || | ||||| ||| ||| |||||| |||| || || || |||||| Sbjct 802772 CTCTCAGCTTTGCCGTTAGACCCCCAAGAGAACACGTCATTGCTTACTGCGTTGTGGTAC 802713 Query 14912 TGTGTCGACCTCTCATCCGACATATTTAAAAATGA 14946 || || ||| | ||||| | |||||||| |||| Sbjct 802712 TGCGTTGACTTGTCATCTAGCTTATTTAAAGATGA 802678 >seq1196 Length=1288689 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || | | |||||| ||||| ||| |||||||||||||||||| || | | Sbjct 730176 CCTCCTCTCAATCTTAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCTGAC 730235 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || || || || |||||||| || |||||||||||||| | || Sbjct 730236 AATGTGCGGCCATCTTCCAGTTGTTTGCCAGCGAAGATAAGTCGCTGCTGGTCCGGAGGG 730295 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||| | | ||| |||| | ||| | | | | ||||| | |||||| Sbjct 730296 ATACCTTCCTTAT-CTTGAATTTTGGCTTTCACATTTTCGATGGTGTCAGAAGCTTCCAC 730354 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | |||||||| || ||||| || || ||||| ||||| |||||| Sbjct 730355 CTCAAGGGTGATGGTCTTCCCCGTAAGTGTTTTTACGAAGATCTGCATT 730403 >seq1251 Length=5235866 Score = 116 bits (128), Expect = 4e-21 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2090545 AAAAATAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2090486 Query 60117 TCACCACTATACTACCGAGGATTGAAT 60143 | ||||||||||||||||||||| ||| Sbjct 2090485 TTACCACTATACTACCGAGGATTTAAT 2090459 >seq1528 Length=1586980 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1528754 CTCCCGGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1528813 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 1528814 TACTACCGAGGATTG 1528828 >seq1207 Length=6027761 Score = 104 bits (114), Expect = 3e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 || |||| |||||| || | || ||||||||| ||||| || || | ||||| || Sbjct 3525709 AAGCGCAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTATAGTCTGAGAGAGTGCGG 3525768 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 | || || | |||||| |||||||| || | ||||||||||| | || | | ||| Sbjct 3525769 CCATCTTCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCT 3525828 Query 43086 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144 |||||| ||| |||| | ||| | || | | ||||| | |||||| || | || Sbjct 3525829 TTGTCC-TGAATTTTAGCTTTAACATTCTCGATGGTGTCAGAAGGTTCCACTTCAAGTGT 3525887 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||| || || || ||||| ||||| || ||||| Sbjct 3525888 GATGGTTTTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 3525926 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| || || | || |||||||||||| || || |||||||| || |||| Sbjct 3525472 CCACCTCGCAAGCGGAGTACTAAATGCAATGTGGATTCTTTCTGAATATTATAGTCAGAG 3525531 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || | ||||| |||||||| || | ||||| ||||| | || Sbjct 3525532 AGGGTACGGCCATCTTCCAATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGGGGG 3525591 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || |||||||| |||||| ||||| || | | ||||| | |||||| Sbjct 3525592 ATGCCTTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACT 3525651 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || ||||| || ||||| || || || ||||| Sbjct 3525652 TCAAGGGTGATGGTCTTTCCCGTGAGGGTCTTAACGAAAATCTGCAT 3525698 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| ||||| || || ||||| | || |||||||||||| ||||| || | Sbjct 2997796 TCCACCTCTCAAACGTAATACTAAATGTAGAGTAGACTCCTTTTGAATGTTGTAGTCGGA 2997855 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || | |||||| || ||||| || | |||||||||||| | || Sbjct 2997856 AAGCGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGGG 2997915 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || ||||||| | ||| |||| | || | | | | ||||| | || | Sbjct 2997916 AATGCCTTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCTA 2997974 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||||||||| || || | ||||| || || |||||||| Sbjct 2997975 CTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2998023 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||| || || || | || || | ||||| ||||| || Sbjct 3527787 CTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAA 3527846 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | ||||||||||| | || | | ||| |||||| ||| |||||| ||||| Sbjct 3527847 GATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC-TGAATTTTTGCTTTGACAT 3527905 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | ||||| | ||||| || | ||||||||||| || || || || |||| Sbjct 3527906 TCTCAATGGTGTCTGAAGGCTCCACTTCAAGTGTGATGGTTTTCCCAGTGAGAGTTTTTA 3527965 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 3527966 CGAAGATCTGCAT 3527978 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| ||| || ||||| || |||||||||| || || || |||| || Sbjct 3525262 ACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTAATCAGAGAGGGTGCGTCCGTCTTCC 3525321 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | || ||||||||||| || || ||||| ||||| | || | | |||||||||| || Sbjct 3525322 AATTGTTTACCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCC-TG 3525380 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | |||| | ||| | | | | ||||| | || || || | || || ||||| Sbjct 3525381 AATTTTGGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACTTCTAAAGTTATAGTTTT 3525440 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| || || ||||| || ||||| Sbjct 3525441 ACCAGTTAAAGTTTTCACAAATATCTGCAT 3525470 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| |||||| || | || ||||||||||||||||| || | || || || | Sbjct 3527991 ACGCAGCACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAGTCGGAGAGGGTGCGACC 3528050 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | ||| || |||||||| || || |||||||| || | ||| | || || || Sbjct 3528051 GTCTTCCAACTGTTTTCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATGCCTTCTTT 3528110 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| |||||| ||| | | | | || || | ||| || || | || || Sbjct 3528111 GTCTTGGATTTTGGCTTTTACGTTTTCGATTGTATCAGAGGGTTCAACTTCCAATGTAAT 3528170 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 |||||| || || | ||||| || || || |||||||| Sbjct 3528171 GGTTTTACCAGTCAAGGTCTTAACGAAAATCTGCATTTT 3528209 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||||||||||||||| | || || || | || || | |||||| || ||||| Sbjct 2996267 TCCTTTTGAATATTGTAATCGGAAAGCGTGCGTCCATCTTCCAACTGCTTGCCTGCGAAG 2996326 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | |||||||||||| | || | || ||||||| | ||| |||| | || | | Sbjct 2996327 ATCAATCGCTGCTGGTCTGGAGGAATGCCTTCCTTGT-CTTGAATTTTAGCCTTAACATT 2996385 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| | || || || | ||||||||||| || || | ||||| || Sbjct 2996386 TTCGATAGTGTCTGATGGCTCTACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGAC 2996445 Query 43172 AAAGATTTGCAT 43183 || |||||||| Sbjct 2996446 GAAAATTTGCAT 2996457 >seq1184 Length=5714943 Score = 104 bits (114), Expect = 3e-17 Identities = 78/90 (87%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||||||||| | ||| ||| ||||||||||||| ||||||||||||||||||||| | Sbjct 1220665 AAAAATTTTGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1220724 Query 60114 TACTCACCACTATACTACCGAGGA-TTGAA 60142 |||| |||||||||||||||| || ||||| Sbjct 1220725 TACTGACCACTATACTACCGAAGACTTGAA 1220754 >seq1974 Length=1666894 Score = 100 bits (110), Expect = 3e-16 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 578729 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 578670 Query 60124 TATACTACCGAGGA-TTGAATATAT 60147 ||||||||||| || |||| |||| Sbjct 578669 TATACTACCGAAGACTTGACGATAT 578645 >seq1562 Length=824124 Score = 100 bits (110), Expect = 3e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 573216 AAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 573275 Query 60118 CACCACTATACTACCGAGGA 60137 |||||||||||||||| || Sbjct 573276 GACCACTATACTACCGAAGA 573295 >seq1337 Length=4112515 Score = 100 bits (110), Expect = 3e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 2435739 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 2435798 Query 60131 CCGAGGA-TTGAATATA 60146 |||| || ||||| ||| Sbjct 2435799 CCGAAGACTTGAACATA 2435815 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 2393860 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 2393801 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 2393800 TATACTACCGAAGA 2393787 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2387172 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2387113 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 2387112 TGACCACTATACTACCGAAGA 2387092 >seq1170 Length=4257058 Score = 100 bits (110), Expect = 3e-16 Identities = 89/109 (82%), Gaps = 3/109 (3%) Strand=Plus/Minus Query 60034 ATAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTC 60093 ||||||| |||| || | | || | || ||||| ||| ||||||||||||| |||| Sbjct 1165180 ATAACAAAAAATAAAAATACAAAAAGAGTTCTCTCC--GGCGGGGAATCGAACCCCGGTC 1165123 Query 60094 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA-TTGA 60141 ||||||||||||||||| ||||| |||||||||||||||| || |||| Sbjct 1165122 TCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAAGACTTGA 1165074 >seq2176 Length=7247 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 4419 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 4478 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 4479 TATACTACCGAAGA 4492 >seq1917 Length=91318 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 57490 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 57549 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 57550 TATACTACCGAAGA 57563 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 58106 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 58165 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 58166 TATACTACCGAAGA 58179 >seq1497 Length=58053 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 39836 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 39777 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 39776 TATACTACCGAAGA 39763 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 41297 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 41238 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 41237 TATACTACCGAAGA 41224 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 42633 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 42574 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 42573 TATACTACCGAAGA 42560 >seq1459 Length=1092699 Score = 98.7 bits (108), Expect = 1e-15 Identities = 85/104 (82%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 60034 ATAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTC 60093 |||| |||||||||| || || || | ||| |||| ||||||||||||| |||| Sbjct 758597 ATAAAAACAAATTAAAAAGTAAAAATAAGAT-CTCTCCGGCGGGGAATCGAACCCCGGTC 758539 Query 60094 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 ||||||||||||||||| ||||| |||||||||||||||| || Sbjct 758538 TCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAAGA 758495 >seq1168 Length=7897672 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| | Sbjct 7392424 ATAAAAAAGGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 7392483 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||||||| || Sbjct 7392484 TACTGACCACTATACTACCGAAGA 7392507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571765414496280