Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq1527 244 1e-59
seq2980 125 8e-24
seq1435 122 1e-22
seq1196 118 1e-21
seq1251 116 4e-21
seq1528 104 3e-17
seq1207 104 3e-17
seq1184 104 3e-17
seq1974 100 3e-16
seq1562 100 3e-16
seq1337 100 3e-16
seq1170 100 3e-16
seq2176 98.7 1e-15
seq1917 98.7 1e-15
seq1497 98.7 1e-15
seq1459 98.7 1e-15
seq1168 98.7 1e-15
>seq1527
Length=671880
Score = 244 bits (270), Expect = 1e-59
Identities = 800/1231 (65%), Gaps = 43/1231 (3%)
Strand=Plus/Minus
Query 96454 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTA--CGATCGTAAGTTTCCCGCGG 96511
|||||| ||| || ||||| || || ||||| || || ||| | ||||| || | |
Sbjct 504621 AAAGTGGTGGGCGCATATTTCGTCGAGTGGGGTGTATATCCGA--GGAAGTTCCCAGTTG 504564
Query 96512 ACAAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAG 96571
|| ||||| || || ||| |||| ||| | ||||||| || || || ||||| ||||
Sbjct 504563 ACCGTGTGCCAATCCCGAATTTGACCCATTTGCTGTACGGATTCATCCCAATTTGTGGAG 504504
Query 96572 GCGACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAAT 96631
| || || |||||||||||| | ||| | | ||| ||| | ||||| ||| ||
Sbjct 504503 GTGATGGGATCAACGACAGTTTGAAAGAAATCGAAGGCAGTTTCCAAGCTTTGCAACGAT 504444
Query 96632 CATGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAA 96691
| || ||| | || || ||||||||| || |||||| | | ||||| || |
Sbjct 504443 CGTGCAGTGGCCGGGAAGACTTCAAGGTTTCGATTCACGACCCGTGGGCCGCTCTCCAGA 504384
Query 96692 AACCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCA 96751
| || || || || | || || || ||||||||| ||||| ||||| ||| | |
Sbjct 504383 AGCCACAGAAGGGATTGTCTTCATGGAACGAACCTTACAAAGGCAACTTTGGACAGTTGA 504324
Query 96752 TGGCTATTCGCAAACA---TAACCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGA 96808
|| || ||||| ||| || | | ||||| |||||| ||||||||| ||||
Sbjct 504323 TG---ATGTTGAAACAAGCTAAACCCGACATGAAAATCTTGCCTTCCATCGGTGGGTGGA 504267
Query 96809 CACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACT 96868
| || || || |||| || ||| | ||| | | ||| || | |||||| | |
Sbjct 504266 CTTTGGCTGATCCCTTCTTCTTCTTCACTGACAAGTCTAAGAGAGACCGATTTGTAGCTT 504207
Query 96869 CGGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGT 96928
| || || ||| | | |||||||| ||||| || || ||||||||||||||||
Sbjct 504206 CAGTGAAGGACTTCCTCGAGACCTGGAAGTTCTTCGACGGTGTTGACATCGACTGGGAGT 504147
Query 96929 TTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACAT 96988
| || ||||| || ||||||||||| || | ||| ||| | |||||| | ||
Sbjct 504146 TCCCTGGCGGCAAAGGTGCCAACCCTAACCTTGGCAGTCC---CAAGGATGGTGATGTAT 504090
Query 96989 ATGTAACACTATTGAAAGAACTACGCCTAATGCTAGACAAACTG---GGTG----TGGTG 97041
| || | || |||||||||| || |||| | | | ||| | || |||
Sbjct 504089 ACGTGTCGCTTATGAAAGAACTTCGTGAAATGTTGAATGAGCTGTCAGCTGAAACTGG-A 504031
Query 97042 AACAAACGCGTGTACGAGTTGACCAGCGCCGTGGGAGCAGGCTACGATAAAATAGACGTG 97101
|| ||| || ||| |||| ||| | | || || | || ||||| | |||
Sbjct 504030 AAGAAA------TATGAGCTGACTTCAGCCATCAGCGCCGGTTGGGACAAAATCCAAGTG 503977
Query 97102 ATAGATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTC 97161
| | ||| || |||| ||||||| | || || |||||||| ||||||
Sbjct 503976 GTGAACTACAAAGAAGCCCAGAAATACATGGATCACATTTTCTTCATGAGTTATGACTTC 503917
Query 97162 AAAGGCGCATGGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGG 97221
||||| || ||||| ||| |||||| || || ||| || ||||||| ||| |||||
Sbjct 503916 AAAGGAGCCTGGTCGAACGACACTTTGGGCCACCAGACATCACTGTACGCGCCTGCGTGG 503857
Query 97222 AACCCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTCAAGCAAAAAGT- 97280
|| || | || | ||||| || || | | || ||| | ||| | || ||
Sbjct 503856 AAACCAAAGGAGACTTACACGACAGATTTCGGAGTTAAATACCTGTTAGCTCAGGGCGTG 503797
Query 97281 -ACCTTCCAACAAAATTGTAGTTGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGC 97339
||| | || || || |||| || || || ||||||||| | || |||| || || |
Sbjct 503796 AACC--CGAAGAAGATAATAGTCGGCGTAGCTATGTACGGCCGTGGTTGGACAGGAGTTC 503739
Query 97340 ACGATTACAAGAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACAT 97399
| | |||| |||| || |||||| || ||||||||||| |||||| | |
Sbjct 503738 AGAACTACACAGACAACAATCCATTTACTGGTAATGCCACAGGTCCCTGCAAAGGTTCTT 503679
Query 97400 GGGAAAACGGTGTCGTCGATTATAGGCAAGTT---AACGATTTTAAAAACAGTCCCGCTT 97456
|| || | |||||||| |||||||| | || || || | | || | |
Sbjct 503678 GGCAAGATGGTGTCGTTGATTATAGAGACATTGCAAATGAGAT--AGCTCAAGGCAAATG 503621
Query 97457 ACACTTACGCTTACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGAAGAGG 97516
| ||| ||||||||| || ||| | ||||| ||||||| | || | || |
Sbjct 503620 GGA-GTACCATTACGACAACGTCGCCCAAGCGCCTTACGTTT---TCAGACC---AGCGA 503568
Query 97517 CGTTGGATCTGATTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGT 97576
| || |||| ||||||| || | || || | | || || | || |||
Sbjct 503567 CTGGAGACTTGATAACTTACGATGATGCCAGATCAGTCATTGAGAAGGGGAAGTATGTGA 503508
Query 97577 TACAGAATAATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGACAATGGCGATTTGT 97636
| ||||| ||||||||| | || || |||||||||||||| |||||||||||| |
Sbjct 503507 GAAGTAATAAGTTAGGTGGTCTATTCGCTTGGGAAATAGATGCGGACAATGGCGATATAC 503448
Query 97637 TAAACGCCATGAACACAGGTCTGGGCAACAG 97667
| || || ||||| | || || || || ||
Sbjct 503447 TCAATGCAATGAATATGGGCCTAGGGAATAG 503417
>seq2980
Length=17643
Score = 125 bits (138), Expect = 8e-24
Identities = 98/116 (84%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 60047 AACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAG 60106
|| || ||| |||||| ||||| |||| ||||||||||||| |||||||||||||||||
Sbjct 8203 AATGTATATAAAAAATAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAG 8262
Query 60107 GCGGACATACTCACCACTATACTACCGAGGATTGAATATATAACTTGAATATTACA 60162
|||| ||||| ||||||||||||||||||||| |||| || |||| ||||||
Sbjct 8263 GCGGGGATACTTACCACTATACTACCGAGGATTTAATAACAAATGTGAA-ATTACA 8317
>seq1435
Length=863250
Score = 122 bits (134), Expect = 1e-22
Identities = 192/275 (70%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 14672 AACGATTACATAATATCGGCCACGTATTTTGAAGGGAAAAAAGTGCATTACAACATTGGC 14731
|||||||| ||||||||||| ||||| ||| | ||||| | | ||||| |||||
Sbjct 802952 AACGATTATATAATATCGGCAACGTACTTTAATTTCAAAAAGATAAAATACAATATTGGT 802893
Query 14732 TTATTTTACTATGTATTGTGGAGTATATGCAGTGGCAAGGAGTGGATGGATAAAAATGTG 14791
||||| || ||| || | |||| | || | || || |||||||||| ||||||
Sbjct 802892 TTATTCTATTATATACTATGGAAGAATTGTGATAATAAAGAATGGATGGATAGAAATGTT 802833
Query 14792 GCTGCCCAATTCCTGAAGTACGTCAAACGTCGCATCGAAATTACAACATGCAAGCTTGGA 14851
| || || || ||||||||| | | || || |||| ||| ||| ||||
Sbjct 802832 GTTGAGCATTTTAAGAAGTACGTAATGAGACGTATTAGTGATACAGTATGTAAGATTGGT 802773
Query 14852 CTCTCGTCTCTTCCCCTGGACCCACAAATGAATACGTCACTGCTGACCGCATTATGGTAC 14911
||||| || | || | ||||| ||| ||| |||||| |||| || || || ||||||
Sbjct 802772 CTCTCAGCTTTGCCGTTAGACCCCCAAGAGAACACGTCATTGCTTACTGCGTTGTGGTAC 802713
Query 14912 TGTGTCGACCTCTCATCCGACATATTTAAAAATGA 14946
|| || ||| | ||||| | |||||||| ||||
Sbjct 802712 TGCGTTGACTTGTCATCTAGCTTATTTAAAGATGA 802678
>seq1196
Length=1288689
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| || | | |||||| ||||| ||| |||||||||||||||||| || | |
Sbjct 730176 CCTCCTCTCAATCTTAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCTGAC 730235
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| || || | || || || || || |||||||| || |||||||||||||| | ||
Sbjct 730236 AATGTGCGGCCATCTTCCAGTTGTTTGCCAGCGAAGATAAGTCGCTGCTGGTCCGGAGGG 730295
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| | | ||| |||| | ||| | | | | ||||| | ||||||
Sbjct 730296 ATACCTTCCTTAT-CTTGAATTTTGGCTTTCACATTTTCGATGGTGTCAGAAGCTTCCAC 730354
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | |||||||| || ||||| || || ||||| ||||| ||||||
Sbjct 730355 CTCAAGGGTGATGGTCTTCCCCGTAAGTGTTTTTACGAAGATCTGCATT 730403
>seq1251
Length=5235866
Score = 116 bits (128), Expect = 4e-21
Identities = 78/87 (90%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 2090545 AAAAATAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2090486
Query 60117 TCACCACTATACTACCGAGGATTGAAT 60143
| ||||||||||||||||||||| |||
Sbjct 2090485 TTACCACTATACTACCGAGGATTTAAT 2090459
>seq1528
Length=1586980
Score = 104 bits (114), Expect = 3e-17
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| ||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1528754 CTCCCGGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1528813
Query 60126 TACTACCGAGGATTG 60140
|||||||||||||||
Sbjct 1528814 TACTACCGAGGATTG 1528828
>seq1207
Length=6027761
Score = 104 bits (114), Expect = 3e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025
|| |||| |||||| || | || ||||||||| ||||| || || | ||||| ||
Sbjct 3525709 AAGCGCAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTATAGTCTGAGAGAGTGCGG 3525768
Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085
| || || | |||||| |||||||| || | ||||||||||| | || | | |||
Sbjct 3525769 CCATCTTCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCT 3525828
Query 43086 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144
|||||| ||| |||| | ||| | || | | ||||| | |||||| || | ||
Sbjct 3525829 TTGTCC-TGAATTTTAGCTTTAACATTCTCGATGGTGTCAGAAGGTTCCACTTCAAGTGT 3525887
Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||||||| || || || ||||| ||||| || |||||
Sbjct 3525888 GATGGTTTTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 3525926
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| |||| || || | || |||||||||||| || || |||||||| || ||||
Sbjct 3525472 CCACCTCGCAAGCGGAGTACTAAATGCAATGTGGATTCTTTCTGAATATTATAGTCAGAG 3525531
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || | ||||| |||||||| || | ||||| ||||| | ||
Sbjct 3525532 AGGGTACGGCCATCTTCCAATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGGGGG 3525591
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || |||||||| |||||| ||||| || | | ||||| | ||||||
Sbjct 3525592 ATGCCTTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACT 3525651
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||| || ||||| || ||||| || || || |||||
Sbjct 3525652 TCAAGGGTGATGGTCTTTCCCGTGAGGGTCTTAACGAAAATCTGCAT 3525698
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||| ||||| ||||| || || ||||| | || |||||||||||| ||||| || |
Sbjct 2997796 TCCACCTCTCAAACGTAATACTAAATGTAGAGTAGACTCCTTTTGAATGTTGTAGTCGGA 2997855
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || |||| || | |||||| || ||||| || | |||||||||||| | ||
Sbjct 2997856 AAGCGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGGG 2997915
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134
| || ||||||| | ||| |||| | || | | | | ||||| | || |
Sbjct 2997916 AATGCCTTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCTA 2997974
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || | ||||||||||| || || | ||||| || || ||||||||
Sbjct 2997975 CTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2998023
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| |||| || || || | || || | ||||| ||||| ||
Sbjct 3527787 CTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAA 3527846
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| | ||||||||||| | || | | ||| |||||| ||| |||||| |||||
Sbjct 3527847 GATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC-TGAATTTTTGCTTTGACAT 3527905
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
|| | | ||||| | ||||| || | ||||||||||| || || || || ||||
Sbjct 3527906 TCTCAATGGTGTCTGAAGGCTCCACTTCAAGTGTGATGGTTTTCCCAGTGAGAGTTTTTA 3527965
Query 43171 CAAAGATTTGCAT 43183
| ||||| |||||
Sbjct 3527966 CGAAGATCTGCAT 3527978
Score = 84.2 bits (92), Expect = 3e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| ||||| ||| || ||||| || |||||||||| || || || |||| ||
Sbjct 3525262 ACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTAATCAGAGAGGGTGCGTCCGTCTTCC 3525321
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
| || ||||||||||| || || ||||| ||||| | || | | |||||||||| ||
Sbjct 3525322 AATTGTTTACCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCC-TG 3525380
Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
| |||| | ||| | | | | ||||| | || || || | || || |||||
Sbjct 3525381 AATTTTGGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACTTCTAAAGTTATAGTTTT 3525440
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||| || || ||||| || |||||
Sbjct 3525441 ACCAGTTAAAGTTTTCACAAATATCTGCAT 3525470
Score = 84.2 bits (92), Expect = 3e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||| || | || ||||||||||||||||| || | || || || |
Sbjct 3527991 ACGCAGCACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAGTCGGAGAGGGTGCGACC 3528050
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || | ||| || |||||||| || || |||||||| || | ||| | || || ||
Sbjct 3528051 GTCTTCCAACTGTTTTCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATGCCTTCTTT 3528110
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| |||||| ||| | | | | || || | ||| || || | || ||
Sbjct 3528111 GTCTTGGATTTTGGCTTTTACGTTTTCGATTGTATCAGAGGGTTCAACTTCCAATGTAAT 3528170
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|||||| || || | ||||| || || || ||||||||
Sbjct 3528171 GGTTTTACCAGTCAAGGTCTTAACGAAAATCTGCATTTT 3528209
Score = 82.4 bits (90), Expect = 9e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||||||||||||||| | || || || | || || | |||||| || |||||
Sbjct 2996267 TCCTTTTGAATATTGTAATCGGAAAGCGTGCGTCCATCTTCCAACTGCTTGCCTGCGAAG 2996326
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| | |||||||||||| | || | || ||||||| | ||| |||| | || | |
Sbjct 2996327 ATCAATCGCTGCTGGTCTGGAGGAATGCCTTCCTTGT-CTTGAATTTTAGCCTTAACATT 2996385
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||| | || || || | ||||||||||| || || | ||||| ||
Sbjct 2996386 TTCGATAGTGTCTGATGGCTCTACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGAC 2996445
Query 43172 AAAGATTTGCAT 43183
|| ||||||||
Sbjct 2996446 GAAAATTTGCAT 2996457
>seq1184
Length=5714943
Score = 104 bits (114), Expect = 3e-17
Identities = 78/90 (87%), Gaps = 4/90 (4%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
||||||||| | ||| ||| ||||||||||||| ||||||||||||||||||||| |
Sbjct 1220665 AAAAATTTTGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1220724
Query 60114 TACTCACCACTATACTACCGAGGA-TTGAA 60142
|||| |||||||||||||||| || |||||
Sbjct 1220725 TACTGACCACTATACTACCGAAGACTTGAA 1220754
>seq1974
Length=1666894
Score = 100 bits (110), Expect = 3e-16
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 578729 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 578670
Query 60124 TATACTACCGAGGA-TTGAATATAT 60147
||||||||||| || |||| ||||
Sbjct 578669 TATACTACCGAAGACTTGACGATAT 578645
>seq1562
Length=824124
Score = 100 bits (110), Expect = 3e-16
Identities = 70/80 (88%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117
|||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct 573216 AAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 573275
Query 60118 CACCACTATACTACCGAGGA 60137
|||||||||||||||| ||
Sbjct 573276 GACCACTATACTACCGAAGA 573295
>seq1337
Length=4112515
Score = 100 bits (110), Expect = 3e-16
Identities = 69/77 (90%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130
|||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2435739 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 2435798
Query 60131 CCGAGGA-TTGAATATA 60146
|||| || ||||| |||
Sbjct 2435799 CCGAAGACTTGAACATA 2435815
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 2393860 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 2393801
Query 60124 TATACTACCGAGGA 60137
||||||||||| ||
Sbjct 2393800 TATACTACCGAAGA 2393787
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| |||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 2387172 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2387113
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||| ||
Sbjct 2387112 TGACCACTATACTACCGAAGA 2387092
>seq1170
Length=4257058
Score = 100 bits (110), Expect = 3e-16
Identities = 89/109 (82%), Gaps = 3/109 (3%)
Strand=Plus/Minus
Query 60034 ATAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTC 60093
||||||| |||| || | | || | || ||||| ||| ||||||||||||| ||||
Sbjct 1165180 ATAACAAAAAATAAAAATACAAAAAGAGTTCTCTCC--GGCGGGGAATCGAACCCCGGTC 1165123
Query 60094 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA-TTGA 60141
||||||||||||||||| ||||| |||||||||||||||| || ||||
Sbjct 1165122 TCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAAGACTTGA 1165074
>seq2176
Length=7247
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 4419 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 4478
Query 60124 TATACTACCGAGGA 60137
||||||||||| ||
Sbjct 4479 TATACTACCGAAGA 4492
>seq1917
Length=91318
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 57490 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 57549
Query 60124 TATACTACCGAGGA 60137
||||||||||| ||
Sbjct 57550 TATACTACCGAAGA 57563
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 58106 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 58165
Query 60124 TATACTACCGAGGA 60137
||||||||||| ||
Sbjct 58166 TATACTACCGAAGA 58179
>seq1497
Length=58053
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 39836 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 39777
Query 60124 TATACTACCGAGGA 60137
||||||||||| ||
Sbjct 39776 TATACTACCGAAGA 39763
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 41297 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 41238
Query 60124 TATACTACCGAGGA 60137
||||||||||| ||
Sbjct 41237 TATACTACCGAAGA 41224
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 42633 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 42574
Query 60124 TATACTACCGAGGA 60137
||||||||||| ||
Sbjct 42573 TATACTACCGAAGA 42560
>seq1459
Length=1092699
Score = 98.7 bits (108), Expect = 1e-15
Identities = 85/104 (82%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 60034 ATAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTC 60093
|||| |||||||||| || || || | ||| |||| ||||||||||||| ||||
Sbjct 758597 ATAAAAACAAATTAAAAAGTAAAAATAAGAT-CTCTCCGGCGGGGAATCGAACCCCGGTC 758539
Query 60094 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137
||||||||||||||||| ||||| |||||||||||||||| ||
Sbjct 758538 TCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAAGA 758495
>seq1168
Length=7897672
Score = 98.7 bits (108), Expect = 1e-15
Identities = 72/84 (86%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
|| ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |
Sbjct 7392424 ATAAAAAAGGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 7392483
Query 60114 TACTCACCACTATACTACCGAGGA 60137
|||| |||||||||||||||| ||
Sbjct 7392484 TACTGACCACTATACTACCGAAGA 7392507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571765414496280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |