Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq1889 86.0 9e-12
seq1207 86.0 9e-12
>seq1889
Length=140810
Score = 86.0 bits (94), Expect = 9e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||||||||| | ||||||||||| ||||| ||||| || || || | | ||
Sbjct 27674 AATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGATAGTGTGCGTCCGTCT 27615
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| || || || || || || |||| || |||||||| ||||| ||||| |||||||||
Sbjct 27614 TCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGGATTCCCTCTTTATCT 27555
Query 146186 TG 146187
||
Sbjct 27554 TG 27553
>seq1207
Length=6027761
Score = 86.0 bits (94), Expect = 9e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||||||||| | ||||||||||| ||||| ||||| || || || | | ||
Sbjct 2996474 AATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGATAGTGTGCGTCCGTCT 2996533
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| || || || || || || |||| || |||||||| ||||| ||||| |||||||||
Sbjct 2996534 TCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGGATTCCCTCTTTATCT 2996593
Query 146186 TG 146187
||
Sbjct 2996594 TG 2996595
Score = 86.0 bits (94), Expect = 9e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||||||||| | ||||||||||| ||||| ||||| || || || | | ||
Sbjct 2998040 AATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGATAGTGTGCGTCCGTCT 2998099
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| || || || || || || |||| || |||||||| ||||| ||||| |||||||||
Sbjct 2998100 TCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGGATTCCCTCTTTATCT 2998159
Query 146186 TG 146187
||
Sbjct 2998160 TG 2998161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743458543921920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |