Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1889 86.0 9e-12 seq1207 86.0 9e-12 >seq1889 Length=140810 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 ||||||||||| | ||||||||||| ||||| ||||| || || || | | || Sbjct 27674 AATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGATAGTGTGCGTCCGTCT 27615 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || || || || || || || |||| || |||||||| ||||| ||||| ||||||||| Sbjct 27614 TCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGGATTCCCTCTTTATCT 27555 Query 146186 TG 146187 || Sbjct 27554 TG 27553 >seq1207 Length=6027761 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 ||||||||||| | ||||||||||| ||||| ||||| || || || | | || Sbjct 2996474 AATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGATAGTGTGCGTCCGTCT 2996533 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || || || || || || || |||| || |||||||| ||||| ||||| ||||||||| Sbjct 2996534 TCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGGATTCCCTCTTTATCT 2996593 Query 146186 TG 146187 || Sbjct 2996594 TG 2996595 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 ||||||||||| | ||||||||||| ||||| ||||| || || || | | || Sbjct 2998040 AATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGATAGTGTGCGTCCGTCT 2998099 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || || || || || || || |||| || |||||||| ||||| ||||| ||||||||| Sbjct 2998100 TCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGGATTCCCTCTTTATCT 2998159 Query 146186 TG 146187 || Sbjct 2998160 TG 2998161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743458543921920