Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1346 111 1e-19 >seq1346 Length=947742 Score = 111 bits (122), Expect = 1e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 ||||| || || || ||||| ||||| || ||||| | ||| ||||| || ||||| Sbjct 446259 ATATATGTGTCAATAAGTAAGGAGTACATCTCAGAATGTACATTTTCCATAGCAATCTGG 446318 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 || |||||||| |||||||||| | | ||| || || | || |||||| ||| | Sbjct 446319 AACCCATAAAAAAATCTAGCTTCTGTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGG 446378 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAttt 16684 ||||| || ||||||||||| ||||| ||||| ||||| | ||||| || |||| | Sbjct 446379 TTTTCATTGACTATTCCATCTGACGCTGCGAAAAATGCAAGCACATGTTTGATGAAATGT 446438 Query 16685 ttttCG 16690 |||| Sbjct 446439 CGTTCG 446444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462469789998600