Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 96.9 7e-15
>seq1251
Length=5235866
Score = 96.9 bits (106), Expect = 7e-15
Identities = 489/773 (63%), Gaps = 60/773 (8%)
Strand=Plus/Minus
Query 93571 TTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGGC 93630
|| || ||||||||| |||||| | |||| | | || || || || || ||||||
Sbjct 3096028 TTGACAACTTGGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGC 3095969
Query 93631 TCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAACA 93690
||||| |||||| ||| || || || ||||| || || ||||||||||| ||||| ||
Sbjct 3095968 TCAAAAGATTCATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACT 3095909
Query 93691 AACATTGAATTGTGAACACCATACTTCATAATGTCCCTTCTCAATTGCTCCCAATCGTGA 93750
| | ||||||| ||| |||| || ||| | | ||||| || ||| ||
Sbjct 3095908 AGTAGTGAATTGCGAAGTCCATGTTTTGCAATTTTGTCTTTCAATGCCTGCCAGTCCC-- 3095851
Query 93751 ATTGGCAAAGAGTTGAAATATATGTCCCTATTCTTAATATTTTCCTTCCCCATGTCAAAT 93810
|||| | || || | ||| |||| ||| ||| ||
Sbjct 3095850 --------AGAGGT-------------CTGTTGG----AGTTTTGTTCCACATCTCATAT 3095816
Query 93811 TGGAAAATCCCTTTGCTCAAAGGACTACCCTCAAACAGCTCATATGTTTCTCCCTTTTCT 93870
|| || ||||| | || | ||||||||| | | | |||||| | || | || |
Sbjct 3095815 TGTAATATCCCCTGACTGACAGGACTACCATGATATGTCTCATACA---CCCCATATTTT 3095759
Query 93871 TTGGCAATTTCACATGAAGCTTCCAAGGCACCATAGTATATAGTTTCAAAAATCCTCTTG 93930
| || | |||||| || || || || || || || ||||||||||| || |||
Sbjct 3095758 TCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAATAAATAGTTTCAAATAT----TTG 3095703
Query 93931 TTAATT-AGTGCC---GCTTCTTCAGATTCGAAGGGGATTCTGAGTTTGAAGAACAAATC 93986
|| || ||| || |||| ||| | || || | | | | || |||
Sbjct 3095702 TTGGTTCAGTTTGATAGCAGTTTCACTTTCATATGGTATGCGCATTAATACAAATGTATC 3095643
Query 93987 TGCTAGTCCCTGCACACCCAATCCCATTGGCCTAGTTTTCATATTGGAAATGCGGGTCTT 94046
||||| ||| || ||||| | ||| || || || ||||||| || | ||| |||
Sbjct 3095642 TGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCCTCATATTTGATTTTTGGG-CTT 3095584
Query 94047 --GTCAACTGCATAGAAATTGACATCAATCACCTTGTCGAGATTTCTGGTCATGATTTTT 94104
| || ||| |||| ||||||||||||| | || | ||||| ||| | || |||
Sbjct 3095583 CAGGCA-CTGGATAGTAATTGACATCAATAATTTTATTTAGATTCTGGGTAACTATCTTT 3095525
Query 94105 ACAACCCTCTTCATCTCCCGGTAATCAACATAGGGCCTTAGGGAAGGGATGGGAGAATAC 94164
||| |||| | | ||||| || || | ||| || | ||
Sbjct 3095524 GTGACC-TCTTTAAGTTT-GGTAA-------AG----TT--GTAAGTTTTGTCATCAT-- 3095482
Query 94165 TTCACAAACTTGTTGACTGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCA 94224
|||||||| |||| | || ||||| || || || || ||||| ||||| || | |
Sbjct 3095481 -TCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCAGAT 3095423
Query 94225 CTGTACTGGACAATTTCAGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGG 94284
| |||| |||||||| |||||||| || | | || || |||| | ||||| ||
Sbjct 3095422 GTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCTGA 3095363
Query 94285 TTAGACTTTCTATTGATGGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTC 94337
||| ||| ||||| || |||||| | ||| ||| ||||||||||||||
Sbjct 3095362 TTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTC 3095310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989491430292455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |