Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 508 5e-139
seq1346 86.0 6e-12
>seq1251
Length=5235866
Score = 508 bits (562), Expect = 5e-139
Identities = 1187/1778 (67%), Gaps = 42/1778 (2%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|| ||||| |||| |||| ||| | || | ||||||| | ||||||||||||||||
Sbjct 3096373 TCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATAATACATTCCAGTT 3096314
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| || |||| | |||| | ||||| || ||| || |||||| | || | || | |
Sbjct 3096313 TTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCCATAATTTGGCTCA 3096254
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
||| || ||| | | ||| || ||||||||||| || ||||||||||| || ||||||
Sbjct 3096253 GCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCTGTCTGCCGCCATT 3096194
Query 36970 TCTAAAATACATTTTTGA--GATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
| | || |||||| || ||||||||||| ||||| || | | | |||||| |
Sbjct 3096193 TGAATGGTAG--TTTTGACTGAAATCTCCCAAACAGTTTTGTACAAGTCTCTTATATCTT 3096136
Query 37028 CTGGTAAA----TCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATG 37083
||| || || | || |||||| || ||||||| | ||| ||| || ||
Sbjct 3096135 -TGGGAATGGTTTCAATATTTTGAATTGATCCATTATTATGAATAATGAGATTTTTCATA 3096077
Query 37084 TCATTATTCCACATATTTCTACTTAT--TAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141
|| | || ||| || || ||| | || || | ||||| ||| |||| ||||| |
Sbjct 3096076 TCTTCATCCCA--TAGCTCAGCTTCTGTTAAATCACGCAATAAGTGATGATTGACAACTT 3096019
Query 37142 GAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201
| || ||||| |||||||| | |||| || ||||| || | || |||| || |
Sbjct 3096018 GGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGCTCAAAAGATT 3095959
Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261
|||| || | | |||||| | ||| || ||||||||||| || |||| ||| || ||
Sbjct 3095958 CATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACTAGTAGTGAAT 3095899
Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321
| | | ||||||| | |||| | | ||| | | | | ||| ||||| | |||||||
Sbjct 3095898 TGCGAAGTCCATGTTTTGCAATTTTGTCTTTCAATGCCTGCCAGTCCCAGAGGTCTGTTG 3095839
Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381
| | || |||||| |||||||||| || || | ||| | ||| | | | |||||
Sbjct 3095838 GAGTTTTGTTCCACATCTCATATTGTAATATCCCCTGACTGACAGGACTACCATGATATG 3095779
Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441
||||||| || || ||| || | ||| ||||| | |||| || | ||||| |
Sbjct 3095778 TCTCATACACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAATAAA 3095719
Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501
| ||||| || |||||| || | | | | || ||| || || ||| || ||
Sbjct 3095718 TAGTTTCAAATATTTGTTGGTTCAGTTTGATAGCAGTTTCACTTTCATATGGTATGCGCA 3095659
Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTAT 37561
||||| ||| ||| || || || || |||||||| || || ||||| || || |||
Sbjct 3095658 TTAATACAAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCCTCATAT 3095599
Query 37562 TAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTT 37621
| ||| | | ||| ||||||||| ||||||| ||| || |||||||||||||| |
Sbjct 3095598 TTGATTTTTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTAGATTCT 3095539
Query 37622 ---TAACTAGTATTT------TC-GTAATTATTCTCAACTTGTCGAACATAAATACGTTA 37671
|||||| | ||| || ||| | | | || |||| | | || |
Sbjct 3095538 GGGTAACTA-TCTTTGTGACCTCTTTAAGTTTGGTAAAGTTGT------AAGTTTTGTCA 3095486
Query 37672 TTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCG 37731
| ||| ||||| | |||| | ||||||| ||| ||||| || || ||||||| |
Sbjct 3095485 TCATTCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCA 3095426
Query 37732 TTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTT 37791
|| | | | ||| ||||| || | || || || ||||||| || | ||| |
Sbjct 3095425 GATGTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTC 3095366
Query 37792 TGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATT 37851
||||| || ||||||| | ||| || |||| ||||| || ||||| ||||| |
Sbjct 3095365 TGATTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTACT 3095306
Query 37852 TGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTT----TAAtttt 37907
|| || || ||||||| |||||| | | |||||| || | | || ||| ||
Sbjct 3095305 TGTGCTTCAATAATAGCTTTCCACAGTATCTGTGCTTTGAC--TTGTTTCACATAACGTT 3095248
Query 37908 tttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAA 37967
|||| | ||| |||| | ||| || | ||| || | ||||| |||| |||
Sbjct 3095247 TTTCCT--GTTCATATTTTTCATACAAAGCCTCAAACTCTTCACCCCAGCAATCGGCTAA 3095190
Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027
|||||| | || || ||||| | | ||| ||||||| |||||| || |||| |||
Sbjct 3095189 ACCTGGAGAATCATGAGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTTCAT 3095130
Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087
||||||||| || | ||| | |||| ||| | ||| | | | ||| || || ||
Sbjct 3095129 AAATAAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACC 3095070
Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147
||||||| |||| |||||| |||||||||||||| ||||| ||||||| ||| |
Sbjct 3095069 ATGATTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACAC 3095010
Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207
| | || || || | ||||| || || || | | |||||| | |||||||| ||
Sbjct 3095009 TGCGAAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGTA 3094950
Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267
| | |||||||| ||||||||||| || || ||| | || | || || || ||
Sbjct 3094949 AACACGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGCC 3094890
Query 38268 CTTAGCTCGTAT--ATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAA 38325
|| |||| || | | | || ||| || || ||||| || ||| || || |||
Sbjct 3094889 TTTGGCTCTAATGCAGTGCACATGAACA--CCAATACCACCAGCTGATTTAGAGATCAAA 3094832
Query 38326 GCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATA 38385
|| || ||||| || || ||| |||| || || || |||||||| | || | | | |
Sbjct 3094831 GCACACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAGA 3094772
Query 38386 AAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGT 38445
||||| ||||| || || || || | || ||| | || ||| |||||
Sbjct 3094771 AAACATGAAGACAACTGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATGA 3094712
Query 38446 ATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCG 38505
|||| |||| || || || |||| ||||| | || | |||| | ||| | ||
Sbjct 3094711 GTGAAATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCACCA 3094652
Query 38506 TGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543
|| || || | ||| || ||||||| |||||| || ||
Sbjct 3094651 TGTATTCCGATAGAAACTCTCATTAACATATGCTGCGG 3094614
>seq1346
Length=947742
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/234 (69%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 11891 TCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCT 11950
|| || | |||||| || || | ||| ||||| || ||||| | ||||||||||||
Sbjct 446253 TCCCTGATATATGTGTCAATAAGTAAGGAGTACATCTCAGAATGTACATTTTCCATAGCA 446312
Query 11951 ATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTTC 12009
|| || || ||||| ||| ||| || |||| ||| || || || | ||||||||
Sbjct 446313 ATCTGGAACCCATAAAAAAATCTAGCTTCTG-TCACTTGGACCTCTTGTGAGAATCTTTC 446371
Query 12010 CGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTAT 12069
||| || ||||| || || ||||| | ||| |||||||| || | |||||| ||
Sbjct 446372 TACTAGGTTTTCATTGACTATTCCATCTGACGCTGCGAAAAATGCAAGCACATGTTTGAT 446431
Query 12070 AAAGTATTTTTC---GTCTTT-AGTTAATTTATCCCAATCATCTAAATCNTTTG 12119
|| | | ||| |||||| ||| | ||||||||| |||||| | ||
Sbjct 446432 GAAATGTCGTTCGCAGTCTTTCAGTGA----ATCCCAATCTGATAAATCCTGTG 446481
Score = 82.4 bits (90), Expect = 7e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 12116 TTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTC 12175
||||||||||| |||||||| || |||||||| |||| ||| | ||||||||||||
Sbjct 446683 TTTGATAAATCCACTTCTTCCACCGTCCAAAATGATGCCTCTGCCTTCTTATACATTTTC 446742
Query 12176 CAGATATCATGATACTTAATAGGGAAAATAACGAA 12210
|| || || |||||| ||| ||||| || || ||
Sbjct 446743 CATATGTCGGGATACTGAATGGGGAATATTACAAA 446777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468482041255440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |