Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 590 9e-164
seq1346 114 2e-20
>seq1251
Length=5235866
Score = 590 bits (654), Expect = 9e-164
Identities = 1213/1783 (68%), Gaps = 44/1783 (2%)
Strand=Plus/Minus
Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767
||| |||| ||| |||||||| | | || || || || || |||||||| ||||||||
Sbjct 3096377 CTTATCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATAATACATTCC 3096318
Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827
||||| ||||| | |||| | || || || ||| |||||||| |||| | ||
Sbjct 3096317 AGTTTTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCCATAATTTGG 3096258
Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887
|| |||| ||| ||||| | || || |||||||| ||||| || || |||||||| ||
Sbjct 3096257 CTCAGCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCTGTCTGCCGC 3096198
Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 78946
||||| ||| | || || || ||| ||||||| |||||| || || || |||| |||
Sbjct 3096197 CATTTGAATGGTAGTTTTGACTGAAATCTCCCAAACAGTTTTGTACAAGTCTCTTA-TAT 3096139
Query 78947 CTTCTGGAA-GGTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
||| |||| ||||| |||| ||||| |||||| || ||||| ||| || |
Sbjct 3096138 CTTTGGGAATGGTTTCAATATTTTGAATTGATCCATTATTATGAATAATGAGATTTTTCA 3096079
Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
| ||||||| ||||| | || |||||| | | | | || |||| || ||||
Sbjct 3096078 TATCTTCATCCCATAGCTCAGCTTCTGTTAAATCACGCAATAAGTGATGATTGACAACTT 3096019
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
| |||||||| || ||||| | | |||||||||| || | || || | ||||
Sbjct 3096018 GGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGCTCAAAAGATT 3095959
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183
|||| ||||| | ||||| || ||||| || || |||||||| || || | || ||
Sbjct 3095958 CATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACTAGTAGTGAAT 3095899
Query 79184 TTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241
| | ||| || ||| | || ||||| ||||| | | | ||| ||||| || || |
Sbjct 3095898 TGCGAAGTCC--ATGTTTTGCAATTTTGTCTTTCAATGCCTGCCAGTCCCAGAGGTCTGT 3095841
Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGC-GTATGATCCTGTGT 79300
|| ||||| | |||||||||| || || | ||| | | | | | || |
Sbjct 3095840 TGGAGTTTTGTTCCACATCTCATATTGTAATATCCCCTGACTGACAGGACTACCATGA-T 3095782
Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360
|||| ||||| || | ||||| || ||||||||||| |||||||| ||||||||||
Sbjct 3095781 ATGTCTCATACACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAAT 3095722
Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGG-AT-- 79417
|||| ||||| || || | | || || | || | || ||| |||| ||
Sbjct 3095721 AAATAGTTTCAAATATTTGTTGGTTCAGTTTGATAGCAGTTTCACTTTCATATGGTATGC 3095662
Query 79418 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 79477
|||| | ||| | |||||||||||||| ||||| || || |||||||| || |
Sbjct 3095661 GCATTAA---TACAAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCC 3095605
Query 79478 TCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 79537
|| |||| || ||| ||||| || | ||||| ||||| | ||| ||||||||||| |
Sbjct 3095604 TCATATTTGATTTTTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTA 3095545
Query 79538 GATTC---CTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAAT--CAAATCGT-C 79591
||||| | ||||| ||||| || || || |||||| ||| | || | |
Sbjct 3095544 GATTCTGGGTAACTAT--CTTTG-TGACCTCTTTAAGTTTGGTAAAGTTGTAAGTTTTGT 3095488
Query 79592 CATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAG 79651
|||| | |||||||||||||| || | |||||| | |||||||| ||| |||| |
Sbjct 3095487 CATCATTCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTG 3095428
Query 79652 CATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTT 79711
|| | ||| | | ||||| ||||| | ||| ||||| ||||| || |||| |||||
Sbjct 3095427 CAGATGTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTT 3095368
Query 79712 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAA 79771
||||||||||| | ||||| |||||||| || | || | || || |||||||| |
Sbjct 3095367 TCTGATTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTA 3095308
Query 79772 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTC- 79830
|| | ||| ||||| |||||||| | | | || || ||||||| || |
Sbjct 3095307 CTTGTGCTTCAATAATAGCTTTCCACAGTATCTGTGCTTT-------GACTTGTTTCACA 3095255
Query 79831 ------TTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCG 79884
||||| ||| |||| | ||| || || ||||| || ||||| ||||
Sbjct 3095254 TAACGTTTTTCCTGTTCATATTTTTCATACAAAGCCTCAAACTCTTCACCCCAGCAATCG 3095195
Query 79885 TCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGT 79944
|||| || ||| | || | ||| ||||| | ||| ||| ||| | | || |||
Sbjct 3095194 GCTAAACCTGGAGAATCATGAGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGT 3095135
Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004
|||||||| | ||| |||||||| || || ||| || ||||| | | |||||
Sbjct 3095134 TTCATAAATAAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCT 3095075
Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064
|| || ||||||||| | ||| || ||| | | ||||||| |||||| ||||| ||
Sbjct 3095074 TTACCATGATTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAA 3095015
Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124
|| | || | | | ||||| ||||| || || || || || | ||||| || ||||||
Sbjct 3095014 TACACTGCGAAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTA 3094955
Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184
|| ||||| | |||||| || | |||||||| || |||||| || || | || |||
Sbjct 3094954 TTGTAAACACGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAG 3094895
Query 80185 CTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 80242
| || |||| | ||| | | | | ||| | ||| || || || || ||||||||
Sbjct 3094894 GTGCCTTTGGCTCTAATGCAGTGC-ACATGA-ACACCAATACCACCAGCTGATTTAGAGA 3094837
Query 80243 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAA 80302
| || || || |||| || || ||||| || ||||| ||||| ||||| |||| ||
Sbjct 3094836 TCAAAGCACACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAA 3094777
Query 80303 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 80362
|||||||| ||||| || | | | || | ||| ||| | || ||| |
Sbjct 3094776 CAAGAAAACATGAAGACAACTGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCG 3094717
Query 80363 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 80422
| || || || |||| ||||| | || |||||| |||| ||| || | || | |||
Sbjct 3094716 CATGAGTGAAATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTT 3094657
Query 80423 ATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGG 80465
||| ||||| | | || | ||||||||| ||||| ||
Sbjct 3094656 CACCATGTATTCCGATAGAAACTCTCATTAACATATGCTGCGG 3094614
>seq1346
Length=947742
Score = 114 bits (126), Expect = 2e-20
Identities = 89/105 (85%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497
|| || |||| |||| ||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct 446676 TGTTACCTTT-GATAAATCCACTTCTTCCACCGTCCAAAATGATGCCTCTGCCTTCTTAT 446734
Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATC 50542
|||| ||||| ||||| |||| || || ||||| || |||||||
Sbjct 446735 ACATTTTCCATATGTCGGGATACTGAATGGGGAATATTACAAATC 446779
Score = 111 bits (122), Expect = 2e-19
Identities = 183/262 (70%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| |||||| ||| ||||| ||| || || || || ||||| || || | ||| |
Sbjct 445068 CCTCATCTCTAGAAATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTTCT 445127
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || ||||| || || || || |||||||| ||||| ||||| ||||| |
Sbjct 445128 TCAGCCAGAAGATGGAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGCAAAAG 445187
Query 50102 CAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT-----ATCCACTTTTGAGCCCAATC 50156
| |||| || |||||| | |||| ||| || ||||||| ||||| ||
Sbjct 445188 CCACAATTCGTTCTCCAAATGTGGCA--GTCTTGCTGGCGATCCACTGCAATGCCCAGTC 445245
Query 50157 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt--ttttttCA 50214
||||||||| || || || |||| || || |||||||| || || ||| | || ||
Sbjct 445246 GGCCTTCTTCTTCACGCAGGGCAGGGTCTCAATGGCATTGAACAGGAAGTCCCTATTGCA 445305
Query 50215 TTACTATCTTTAACATAAGTAT 50236
|| || ||| || ||| |||
Sbjct 445306 ATAACATGTTTTACTTAACTAT 445327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718203248993640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |