Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1346 118 1e-21 >seq1346 Length=947742 Score = 118 bits (130), Expect = 1e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 || ||||| |||||||||||| ||||| ||||| |||| ||||||||||| ||||| Sbjct 446259 ATATATGTGTCAATAAGTAAGGAGTACATCTCAGAATGTACATTTTCCATAGCAATCTGG 446318 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || |||||||| |||||||||| | | ||| || || | |||||||| | | Sbjct 446319 AACCCATAAAAAAATCTAGCTTCTGTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGG 446378 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 |||||||| ||||| ||||| ||||| |||||||| | | | ||| || || | | Sbjct 446379 TTTTCATTGACTATTCCATCTGACGCTGCGAAAAATGCAAGCACATGTTTGATGAAATGT 446438 Query 14322 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 | || | || ||| | |||||| |||||||||| Sbjct 446439 CGTTCGCAGTCTTTCAGTGAATCCCAATCTGATAAATCCT 446478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479684218823400