Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 105 4e-18
seq1196 96.9 2e-15
>seq1207
Length=6027761
Score = 105 bits (116), Expect = 4e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| || | ||||| || || || || || || || || | | || |
Sbjct 3527308 CGCAACACCAAGTGAAGAGTCGATTCCTTCTGGATGTTATAGTCTGAGAGAGTGCGACCA 3527367
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||| |||||||| ||| || ||||| |||||||| | ||| || || |||||
Sbjct 3527368 TCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTA 3527427
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| |||| ||| || ||| ||| ||||| || | ||| || || || ||
Sbjct 3527428 TCCTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGAAGGCTCAACTTCAAGTGTGATA 3527487
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
||||| || ||||||||||| ||||| || ||||||
Sbjct 3527488 GTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3527523
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| || | || || || ||||| || || || || || | | || |
Sbjct 3526168 CGCAACACCAAGTGAAGGGTTGATTCCTTTTGGATGTTATAGTCTGAGAGAGTGCGACCA 3526227
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||| |||||||| ||| || ||||| |||||||| | ||| || || |||||
Sbjct 3526228 TCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTA 3526287
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| |||| ||| || | | ||| ||||| || | ||| || || || ||
Sbjct 3526288 TCCTGAATCTTAGCTTTGACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGTGTGATA 3526347
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
||||| || ||||||||||| ||||| || ||||||
Sbjct 3526348 GTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3526383
Score = 98.7 bits (108), Expect = 6e-16
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| |||| || || | || ||||||||||| || ||||| || ||||| || |||||
Sbjct 3525472 CCACCTCGCAAGCGGAGTACTAAATGCAATGTGGATTCTTTCTGAATATTATAGTCAGAG 3525531
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| | | || ||||||||||||||| || || ||||| || ||||| | |||
Sbjct 3525532 AGGGTACGGCCATCTTCCAATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGGGGG 3525591
Query 33263 ATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|||||||| || || | | | || ||| || | | ||| ||||| ||||
Sbjct 3525592 ATGCCTTCCTTGTCTTGGATTTTAGC---TTTGACATTCTCAATTGTGTCAGAAGGTTCC 3525648
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || || || || || |||||||| || || || |||||||| ||||||
Sbjct 3525649 ACTTCAAGGGTGATGGTCTTTCCCGTGAGGGTCTTAACGAAAATCTGCATG 3525699
Score = 98.7 bits (108), Expect = 6e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| || || || ||||| |||||||| || | || ||||||||||| |||
Sbjct 3527098 GTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCA 3527157
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTT 33292
||| || ||||| |||||||| | ||| || || ||||| || ||| |||
Sbjct 3527158 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGAATTTTAGCTTTA 3527217
Query 33293 ACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTT 33352
|| ||| || ||||| |||| || || || || || |||||||| || ||||||
Sbjct 3527218 ACATTTTCTATTGTGTCAGATGGTTCTACTTCTAGTGTGATGGTTTTTCCAGTGAGAGTT 3527277
Query 33353 TTTACGAAAATTTGCAT 33369
|| ||||| || |||||
Sbjct 3527278 TTGACGAATATCTGCAT 3527294
Score = 96.9 bits (106), Expect = 2e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| || || || ||||| |||||||| || | || ||||||||||| |||
Sbjct 3527782 GTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCA 3527841
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTT 33292
||| || ||||| |||||||| | ||| || || ||||| || ||| |||
Sbjct 3527842 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGAATTTTTGCTTTG 3527901
Query 33293 ACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTT 33352
|| | | ||| ||||| || | || || || || || ||||| || || ||||||
Sbjct 3527902 ACATTCTCAATGGTGTCTGAAGGCTCCACTTCAAGTGTGATGGTTTTCCCAGTGAGAGTT 3527961
Query 33353 TTTACGAAAATTTGCATG 33370
|||||||| || ||||||
Sbjct 3527962 TTTACGAAGATCTGCATG 3527979
Score = 95.1 bits (104), Expect = 8e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
||||| ||||| || || ||||||||||| ||||||||||| | || || ||| |||
Sbjct 3525262 ACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTAATCAGAGAGGGTGCGTCCGTCTTCC 3525321
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280
||||| || ||| || || | ||| || ||||| | || || || || || || |
Sbjct 3525322 AATTGTTTACCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCCTGA 3525381
Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340
|| ||| || ||| ||| ||||| || | ||| || | |||||| |||||
Sbjct 3525382 ATTTTGGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACTTCTAAAGTTATAGTTTTA 3525441
Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || | |||||| || || || ||||||
Sbjct 3525442 CCAGTTAAAGTTTTCACAAATATCTGCATG 3525471
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| || || || || || |||||||| || | || ||||||||||| |||
Sbjct 3525958 GTAGACTCCTTCTGGATGTTATAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCA 3526017
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTT 33292
||| || ||||| |||||||| | ||| || || ||||| || ||| |||
Sbjct 3526018 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGAATTTTAGCTTTG 3526077
Query 33293 ACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTT 33352
|| ||| || ||||| |||| || || || || || |||||||| || ||||||
Sbjct 3526078 ACATTTTCTATTGTGTCAGATGGTTCTACTTCTAGTGTGATGGTTTTTCCAGTGAGAGTT 3526137
Query 33353 TTTACGAAAATTTGCAT 33369
|| ||||| || |||||
Sbjct 3526138 TTGACGAATATCTGCAT 3526154
Score = 84.2 bits (92), Expect = 1e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| || || || ||||| |||||||| || | || ||||||||||| |||
Sbjct 3526414 GTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCA 3526473
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289
||| || ||||| || ||||| | ||| |||||||| || || | | | || |
Sbjct 3526474 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATTTTAGC---T 3526530
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
|| || | | ||| ||||| |||| || || || || || || ||||| || ||
Sbjct 3526531 TTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTCTTTCCAGTGAGG 3526590
Query 33350 GTTTTTACGAAAATTTGCATG 33370
|| || || ||||| ||||||
Sbjct 3526591 GTCTTAACAAAAATCTGCATG 3526611
Score = 84.2 bits (92), Expect = 1e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| || || || ||||| |||||||| || | || ||||||||||| |||
Sbjct 3526642 GTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCA 3526701
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289
||| || ||||| || ||||| | ||| |||||||| || || | | | || |
Sbjct 3526702 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATTTTAGC---T 3526758
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
|| || | | ||| ||||| |||| || || || || || || ||||| || ||
Sbjct 3526759 TTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTCTTTCCAGTGAGG 3526818
Query 33350 GTTTTTACGAAAATTTGCATG 33370
|| || || ||||| ||||||
Sbjct 3526819 GTCTTAACAAAAATCTGCATG 3526839
Score = 84.2 bits (92), Expect = 1e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| || || || ||||| |||||||| || | || ||||||||||| |||
Sbjct 3526870 GTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCA 3526929
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289
||| || ||||| || ||||| | ||| |||||||| || || | | | || |
Sbjct 3526930 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATTTTAGC---T 3526986
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
|| || | | ||| ||||| |||| || || || || || || ||||| || ||
Sbjct 3526987 TTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTCTTTCCAGTGAGG 3527046
Query 33350 GTTTTTACGAAAATTTGCATG 33370
|| || || ||||| ||||||
Sbjct 3527047 GTCTTAACAAAAATCTGCATG 3527067
Score = 84.2 bits (92), Expect = 1e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| || || || ||||| |||||||| || | || ||||||||||| |||
Sbjct 3527554 GTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCA 3527613
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289
||| || ||||| || ||||| | ||| |||||||| || || | | | || |
Sbjct 3527614 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATTTTAGC---T 3527670
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
|| || | | ||| ||||| |||| || || || || || || ||||| || ||
Sbjct 3527671 TTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTCTTTCCAGTGAGG 3527730
Query 33350 GTTTTTACGAAAATTTGCATG 33370
|| || || ||||| ||||||
Sbjct 3527731 GTCTTAACAAAAATCTGCATG 3527751
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/230 (68%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| || || || || ||||| | || ||||| ||||| || ||||| || ||
Sbjct 2997797 CCACCTCTCAAACGTAATACTAAATGTAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAA 2997856
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || || ||| ||||| ||||| || || || || || |||||||| | |||
Sbjct 2997857 AGCGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGGGA 2997916
Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|||||||| || || ||| |||| | || ||| || ||||| || |
Sbjct 2997917 ATGCCTTCCTTGTCTTGAATTTTAGCCT---TAACATTTTCGATAGTGTCTGATGGCTCT 2997973
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || | || || |||||||| || | || || ||||||||||||||
Sbjct 2997974 ACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2998023
>seq1196
Length=1288689
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | | |||||| ||||| || ||||| ||||| |||||||| || ||
Sbjct 730175 ACCTCCTCTCAATCTTAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCTGA 730234
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| || | || |||| ||| || ||| || || | || |||||||||| ||
Sbjct 730235 CAATGTGCGGCCATCTTCCAGTTGTTTGCCAGCGAAGATAAGTCGCTGCTGGTCCGGAGG 730294
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
|| ||||| || || ||| ||| || ||| || ||||| | || ||
Sbjct 730295 GATACCTTCCTTATCTTGAATTTTGGCTTTCACATTTTCGATGGTGTCAGAAGCTTCCAC 730354
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || || || |||||||| ||||||||||| || |||||
Sbjct 730355 CTCAAGGGTGATGGTCTTCCCCGTAAGTGTTTTTACGAAGATCTGCAT 730402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318749234870298
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