Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq1938 82.4 4e-11 >seq1938 Length=78222 Score = 82.4 bits (90), Expect = 4e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || |||||||||||||| || || || || | || || || |||| | Sbjct 46905 GGCTTCTCTGTGGAGGGTCAAGAAAACATACAGGAGATACTTTCCAAGCAGCTGTACCTA 46964 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 ||||| || || || | ||| | |||| | ||||| |||| ||| ||||| | Sbjct 46965 TGTCAGTGCCTAGCCGCTCTTATGCTGGTACGCACGGGTGGACATTTTGTCGTCAAACTC 47024 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAAT 4081 || ||| |||| |||| ||| |||| ||| | | || | |||||||||| |||| || Sbjct 47025 TTTGATGTATTCACACTTTTCAGTGTTGGACTTATTTACATTATGTATAGATGTTTTGAT 47084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276528992001403