Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1435 159 5e-35
>seq1435
Length=863250
Score = 159 bits (176), Expect = 5e-35
Identities = 266/380 (70%), Gaps = 6/380 (2%)
Strand=Plus/Plus
Query 463 TTCAAATGAACTTTCTCCTCAAGAATATCGTCACGCAAAATTCCCTTGTGATTTAACTTT 522
|| ||||| ||||| || | | | ||| || |||| || || |||||||| || |||
Sbjct 802351 TTTAAATGCACTTTTTCTTTGATCACATCATCGGGCAACATGCCTTTGTGATTCAATTTT 802410
Query 523 AGGTAATTCAGCTTGTATAGATTAGATGATTTTTCAATTTCACTGACTAGAAAACCATCT 582
| || || || ||| |||||| | | ||| ||||||||||| | |||||||| |
Sbjct 802411 AAATAGTTGAGTGTGTTCAGATTATACGGTTTGTCAATTTCACTTATAAGAAAACCGTTG 802470
Query 583 ACAGTCTTGAAGATTTTCTCCAACAAATAATAAATTTTCTTTCTCCGTTTTTGG-Atttt 641
|| |||| || ||| | || ||||||||||||| ||||| | || | ||||| ||| |
Sbjct 802471 ACGTTCTTAAATATTCTTTCTAACAAATAATAAACTTTCTCT-TCGCTATTTGGAATTCT 802529
Query 642 tttCAAAGTCATTACGTAACTTAGTAGTTCTTTTCGTTTCTCGATAGGCTTCAAATCTAG 701
|||||| | ||||| |||| || ||| | ||||| | || | | |||||
Sbjct 802530 TTTCAATATAGCTACGTGTCTTATTAAATCTCTACGTTTTTGAATTTTGTCTACATCTAA 802589
Query 702 ATCATAATTGAACCATGTC--AAAATTTCAATCATATAGCGCGCTACGCTATAATACCCT 759
|||||||| || ||| | || ||||| |||||| | || |||| ||| || |
Sbjct 802590 ATCATAATCAAA--ATGGCGTAATATTTCGATCATAGAATCCGTGACGCCGTAAAACATT 802647
Query 760 CTTAGCCGTTCCTGCTTGTAGTGTTGAGGATCATTTTTAAAAATTCCTGAGGACAATTCC 819
|||| ||||| ||| | | | | ||||||| |||||| | | || ||||| ||
Sbjct 802648 CTTAAGCGTTCATGCATAAAATTTACGGGATCATCTTTAAATAAGCTAGATGACAAGTCA 802707
Query 820 ACGCAGTACCATAACGCAGT 839
||||||||||| ||||||||
Sbjct 802708 ACGCAGTACCACAACGCAGT 802727
Score = 89.7 bits (98), Expect = 8e-14
Identities = 219/332 (66%), Gaps = 0/332 (0%)
Strand=Plus/Minus
Query 6089 AATAAAGAAATAGATTATGAAATGGTTGTTTTCCATGCATTCAATGAAGACCCGGAAAAA 6148
||| || | ||| |||| |||| || || ||||| ||| ||||| || || ||
Sbjct 803864 AATGAAAATATACATTACGAAACTGTCGTATTCCACGCAATCAATAAATGTTTGGCTCAA 803805
Query 6149 ATCGACCTTTTAGTAGCTGCACCTTTCTTCAAGAGCCGTTGCATCGTTTATCACAATACC 6208
|| || |||| || ||||| | || ||||| ||||| ||||| | || | |||
Sbjct 803804 ATAGATCTTTCCGTGGCTGCGTCCTTTTTCAAAAGCCGCTGCATTATCTACCGTAATTAT 803745
Query 6209 GAACTTTGTAACCGTACTCATATTTCCAAGGAGTTTGATTATGACAAGATCAGTAGCGAC 6268
||||| | | | | | |||| ||| | ||||| || ||| ||| || | |||
Sbjct 803744 GAACTGTATGATAACATTAATATATCCGAAGAGTTCGACTATAGCAAAATAAACGTCGAA 803685
Query 6269 AACTTCGCAGTTGAAATGCAACAACTTATGTCTTATATTAAATTGAAGTTCATCAATAAA 6328
|| |||||| |||| | | || | ||||| | ||||| |||| ||||||||||
Sbjct 803684 AATTTCGCATCAGAAAAAGATAATCTGAAATCTTACGTGAAATTAAAGTACATCAATAAA 803625
Query 6329 TTCAAACGAGACGCTGATGTTTGGCGAGAAATTGAAAAATTGCATAACCTAAGAAATCGA 6388
||||||| |||||| | | | |||||| | |||||| | || ||||| | ||
Sbjct 803624 TTCAAACACGACGCTCTAGCTCTACAAGAAATAAACAAATTGAAAAAATTAAGAGACAGA 803565
Query 6389 ATGCTTAGAGAATTGTCAGAAAACACACCAAA 6420
| | ||||||||| ||| |||| ||
Sbjct 803564 CTTTTCGTCGAATTGTCATCAAAGTCACCGAA 803533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79068524644593
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |