Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1346 107 2e-18
seq1353 89.7 5e-13
>seq1346
Length=947742
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829
||||| |||||||||| |||||| || || ||||| || || |||||| |||| || |||
Sbjct 446283 TACATCTCAGAATGTACATTTTCCATAGCAATCTGGAACCCATAAAAAAATCTAGCTTCT 446342
Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889
| ||| ||||| | |||| || | | ||||||||| |||||||||||
Sbjct 446343 GTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGGTTTTCATTGACTATTCCATCTGAC 446402
Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTC 21949
|| || |||||||| | | || ||| || |||| ||||||| ||| | | | | |
Sbjct 446403 GCTGCGAAAAATGCAAGCACATGTTTGATGAAATGTCGTTCGCAGTCTTTCAGTGAATCC 446462
Query 21950 CAATCTAATAAATC 21963
|||||| |||||||
Sbjct 446463 CAATCTGATAAATC 446476
>seq1353
Length=2130601
Score = 89.7 bits (98), Expect = 5e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919
|| |||||||||||| |||||||||||||| | |||| ||||| |||||| || ||
Sbjct 1736942 TCTTATGACTCCTGTGCGGCCTATGTTGGCTGAAGCATGCAAATCTGTAGAAATGGCTAT 1736883
Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979
| |||| | | || |||||||| || | |||||||| || || | |||||| |
Sbjct 1736882 GAAAAAATGTCCCAACGGTATGTATTCTGAAATCAAATATGACGGAGAAAGAGTACAAGT 1736823
Query 131980 TCATAAAAAAGATAATG 131996
|||||||||| | |||
Sbjct 1736822 GCATAAAAAAGGTGATG 1736806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531852257403240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |