Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 527 8e-145
seq1346 111 2e-19
>seq1251
Length=5235866
Score = 527 bits (584), Expect = 8e-145
Identities = 1195/1778 (67%), Gaps = 34/1778 (2%)
Strand=Plus/Minus
Query 61985 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62044
||| |||| ||| |||||||| | | || || || || || |||||||| ||||||||
Sbjct 3096377 CTTATCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATAATACATTCC 3096318
Query 62045 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62104
||||| ||||| | |||| | ||||| || ||| |||||||| |||| | ||
Sbjct 3096317 AGTTTTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCCATAATTTGG 3096258
Query 62105 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62164
|| |||| ||| ||||| | || || |||||||| ||||| || || |||||||| ||
Sbjct 3096257 CTCAGCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCTGTCTGCCGC 3096198
Query 62165 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62223
||||| ||| | || || || ||| ||||||| |||||| || || || |||| |||
Sbjct 3096197 CATTTGAATGGTAGTTTTGACTGAAATCTCCCAAACAGTTTTGTACAAGTCTCTTA-TAT 3096139
Query 62224 CTTCTGGAA-GGTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280
||| |||| ||||| |||| ||||| |||||| || ||||| ||| || |
Sbjct 3096138 CTTTGGGAATGGTTTCAATATTTTGAATTGATCCATTATTATGAATAATGAGATTTTTCA 3096079
Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340
| || |||| ||||| | || |||||| | | | | || |||| || ||||
Sbjct 3096078 TATCTTCATCCCATAGCTCAGCTTCTGTTAAATCACGCAATAAGTGATGATTGACAACTT 3096019
Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400
| |||||||| || ||||| | | |||||||||| || | || || | || |
Sbjct 3096018 GGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGCTCAAAAGATT 3095959
Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460
|||| ||||| | ||||| || ||||| ||||| |||||||| || || | || ||
Sbjct 3095958 CATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACTAGTAGTGAAT 3095899
Query 62461 TTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 62518
| | ||| || ||||| || ||||| ||||| | | | ||| | ||| || || |
Sbjct 3095898 TGCGAAGTCC--ATGTTTTGCAATTTTGTCTTTCAATGCCTGCCAGTCCCAGAGGTCTGT 3095841
Query 62519 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 62577
|| ||||| || || | |||| | | || | | | ||
Sbjct 3095840 TGGAGTTTTGTTCCACATCTCATATTGTAATATCCCCTGACTGACAGGACTACCATG-AT 3095782
Query 62578 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62637
|||| || || || | || || || | ||||||||| |||||||| || |||||||
Sbjct 3095781 ATGTCTCATACACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAAT 3095722
Query 62638 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGG-AT 62694
|||| ||||| || || | | || || | || || || || ||| |||| ||
Sbjct 3095721 AAATAGTTTCAAATATTTGTTGGTTCAGTTTGATAGCAGTTTCA--CTTTCATATGGTAT 3095664
Query 62695 AAT--TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62752
|||| | || | | || ||||||||||| ||||| || || |||||||| ||
Sbjct 3095663 GCGCATTAATACAA---ATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTG 3095607
Query 62753 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 62812
||| |||| || ||| ||||| || | ||||| ||||| | ||| |||||||||||
Sbjct 3095606 CCTCATATTTGATTTTTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATT 3095547
Query 62813 GAGATTTCTGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCC 62868
||||| | || || ||||| || || || |||||| ||| | | |
Sbjct 3095546 TAGATTCTGGGTAACTATCTTTGTG-ACCTCTTTAAGTTTGGTAAAGTTGTAAGTTTTGT 3095488
Query 62869 CATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62928
|||| | |||||||||||||| |||| |||||| | |||||||| ||| |||| |
Sbjct 3095487 CATCATTCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTG 3095428
Query 62929 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTT 62988
|| | ||| | | || || ||||| | || ||||| || || || |||| |||||
Sbjct 3095427 CAGATGTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTT 3095368
Query 62989 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63048
||||||||||| | ||||| |||||||| || | || |||| || |||||||| |
Sbjct 3095367 TCTGATTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTA 3095308
Query 63049 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCC 63108
|| | ||| ||||| |||||||| | | | || || | | | || || |
Sbjct 3095307 CTTGTGCTTCAATAATAGCTTTCCACAGTATCTGTGCTTTGACTT--GTTTCACATAACG 3095250
Query 63109 TTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAA 63166
||| || | || ||| | |||||| || ||||| || ||||| || | | ||
Sbjct 3095249 TTTTTCCTGTTCATATTTTTCATACAAAGCCTCAAACTCTTCACCCCAGCAATCGGCTAA 3095190
Query 63167 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 63226
|| ||| | |||| || ||||| | ||| ||| | | | | || ||||||||
Sbjct 3095189 ACCTGGAGAATCATGAGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTTCAT 3095130
Query 63227 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63286
||| | ||| |||||||| || || ||| || ||||| | | |||||| || ||
Sbjct 3095129 AAATAAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACC 3095070
Query 63287 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63346
||||||||| | ||| || ||| | | ||||||| |||||| ||||| || || |
Sbjct 3095069 ATGATTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACAC 3095010
Query 63347 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63406
|| | | | || |||||||| || || || || || | ||||| || |||||||| ||
Sbjct 3095009 TGCGAAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGTA 3094950
Query 63407 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCC 63466
||| | |||||| || | ||||| ||||| | |||||| || || | || ||| | ||
Sbjct 3094949 AACACGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGCC 3094890
Query 63467 ACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63524
|||| | ||| | | | | ||| | ||| || || || || ||||||||| ||
Sbjct 3094889 TTTGGCTCTAATGCAGTGC-ACATGA-ACACCAATACCACCAGCTGATTTAGAGATCAAA 3094832
Query 63525 GCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGA 63584
|| || |||| || |||||||| || ||||| ||||| ||||| |||| || |||
Sbjct 3094831 GCACACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAGA 3094772
Query 63585 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63644
||||| ||||| || | | | || | ||| ||| | || ||| || ||
Sbjct 3094771 AAACATGAAGACAACTGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATGA 3094712
Query 63645 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63704
|| || |||| ||||| | || |||||| |||| ||| || | || | ||| |
Sbjct 3094711 GTGAAATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCACCA 3094652
Query 63705 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63742
|| ||||| | | || | ||||||||| ||||| ||
Sbjct 3094651 TGTATTCCGATAGAAACTCTCATTAACATATGCTGCGG 3094614
>seq1346
Length=947742
Score = 111 bits (122), Expect = 2e-19
Identities = 183/262 (70%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
|||| |||||| ||| ||||| ||| || || || || ||||| || || | ||| |
Sbjct 445068 CCTCATCTCTAGAAATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTTCT 445127
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445
| ||||| || ||||||||||| || || |||||||| ||||| ||||| ||||| |
Sbjct 445128 TCAGCCAGAAGATGGAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGCAAAAG 445187
Query 33446 CAATAAGTCTCTCTCCATAACCGGCGCTGTCATG-----TATCCACTTTTGAGCCCAATC 33500
| | || || ||||| || | || ||| || ||||||| ||||| ||
Sbjct 445188 CCACAATTCGTTCTCC--AAATGTGGCAGTCTTGCTGGCGATCCACTGCAATGCCCAGTC 445245
Query 33501 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt--ttttttCA 33558
||||||||| || || || |||| || || |||||||| || || ||| | || ||
Sbjct 445246 GGCCTTCTTCTTCACGCAGGGCAGGGTCTCAATGGCATTGAACAGGAAGTCCCTATTGCA 445305
Query 33559 TTACTATCTTTAACATAAGTAT 33580
|| || ||| || ||| |||
Sbjct 445306 ATAACATGTTTTACTTAACTAT 445327
Score = 109 bits (120), Expect = 7e-19
Identities = 88/105 (84%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 33782 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33841
|| || |||| |||| ||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct 446676 TGTTACCTTT-GATAAATCCACTTCTTCCACCGTCCAAAATGATGCCTCTGCCTTCTTAT 446734
Query 33842 ACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATC 33886
|||| ||||| ||||| ||| || || ||||| || |||||||
Sbjct 446735 ACATTTTCCATATGTCGGGATACTGAATGGGGAATATTACAAATC 446779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622890348281160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |