Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1527 342 5e-89
seq1196 91.5 1e-13
seq1207 86.0 6e-12
>seq1527
Length=671880
Score = 342 bits (378), Expect = 5e-89
Identities = 816/1210 (67%), Gaps = 38/1210 (3%)
Strand=Plus/Minus
Query 62038 TAAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGA 62097
|||||| || | ||||||||| ||||| ||||| || ||||| || || || || || ||
Sbjct 504622 TAAAGTGGTGGGCGCATATTTCGTCGAGTGGGGTGTATATCCGAGGAAGTTCCCAGTTGA 504563
Query 62098 TCGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGG 62157
|| ||||| | || ||| | | ||| | || || ||||| || || || || || ||
Sbjct 504562 CCGTGTGCCAATCCCGAATTTGACCCATTTGCTGTACGGATTCATCCCAATTTGTGGAGG 504503
Query 62158 CGACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTC 62217
|| || || ||||||||| | || || || ||||| ||||| | || || ||
Sbjct 504502 TGATGGGATCAACGACAGTTTGAAAGAAATCGAAGGCAGTTTCCAAGCTTTGCAACGATC 504443
Query 62218 GTGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAA 62277
||| || || || ||||| || || |||||||| ||||||||||| || |||||||
Sbjct 504442 GTGCAGTGGCCGGGAAGACTTCAAGGTTTCGATTCACGACCCGTGGGCCGCTCTCCAGAA 504383
Query 62278 ACCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGAT 62337
||||| || | | | | ||||||||||| |||||||| || ||||| || |||||
Sbjct 504382 GCCACAGAAGGGATTGTCTTCATGGAACGAACCTTACAAAGGCAACTTTGGACAGTTGAT 504323
Query 62338 GGCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTACCTTCGATAGGCGGCTGGACATT 62397
| |||| || || || |||| ||| | || ||||| || || || ||||| ||
Sbjct 504322 GATGTTGAAACAAGCTAAACCCGACATGAAAATCTTGCCTTCCATCGGTGGGTGGACTTT 504263
Query 62398 ATCCGATCCGTTCTTTTATTTTCAC-GATGTGGCCAAACGCAAGATTTTTGTCGATTCCG 62456
| ||||| ||||| | | ||||| || | | || | | ||||| | ||| |
Sbjct 504262 GGCTGATCCCTTCTTCT-TCTTCACTGACAAGTCTAAGAGAGACCGATTTGTAGCTTCAG 504204
Query 62457 TCATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGAGTTTC 62516
| | || || | |||||||||| || ||||| ||||| |||||||| |||||||| |
Sbjct 504203 TGAAGGACTTCCTCGAGACCTGGAAGTTCTTCGACGGTGTTGACATCGACTGGGAGTTCC 504144
Query 62517 CCGGCGGGAAAGGCGCCAATCCCAACGTAGGCGACGTCGAACGCGATCGCGAAACGTACA 62576
| ||||| ||||| ||||| || ||| | ||| ||| | | ||| | | | ||| |
Sbjct 504143 CTGGCGGCAAAGGTGCCAACCCTAACCTTGGC--AGTCCCAAG-GATGGTG--ATGTATA 504089
Query 62577 CGATT--CTGTTGAGAGATTTACGCGAAGCCCTCGACCGTCTCTCAATCGAAAC-GAATC 62633
|| | || ||| ||| | || ||| | | || ||| ||||| | |
Sbjct 504088 CGTGTCGCTTATGAAAGAACTTCGTGAAATGTTGAATGAGCTGTCAGCTGAAACTGGAAA 504029
Query 62634 GAACGTACGAATTGACTAGCGCGATCAGCGCCGGCGATGACAAAATTGCCGTAGTCGATT 62693
||| || || ||||| || ||||||||||| |||||||| || || | |
Sbjct 504028 GAA-ATATGAGCTGACTTCAGCCATCAGCGCCGGTTGGGACAAAATCCAAGTGGTGAACT 503970
Query 62694 ACACTGAAGCGCAAAAATATTTGGATTATAtttttttAATGACATACGATTTCAAAGGAG 62753
||| ||||| || ||||| ||||| | ||||| || |||| || || ||||||||||
Sbjct 503969 ACAAAGAAGCCCAGAAATACATGGATCACATTTTCTTCATGAGTTATGACTTCAAAGGAG 503910
Query 62754 CTTGGTCGAATAGCGATTTGGGATATCAAACGACTCTGTACGCGCCTTCGTTTAACCCTA 62813
| |||||||| | |||||| | || || | |||||||||||| ||| || || |
Sbjct 503909 CCTGGTCGAACGACACTTTGGGCCACCAGACATCACTGTACGCGCCTGCGTGGAAACCAA 503850
Query 62814 AAGAGCATTATACGACCGATTTTGCCGTT-----CGTGCTATGCTCA-AGCAAAAAGTCG 62867
| ||| ||| ||||| ||||| | ||| | || || ||||| || || ||
Sbjct 503849 AGGAGACTTACACGACAGATTTCGGAGTTAAATACCTGTTA-GCTCAGGGCGTGAACCCG 503791
Query 62868 AAAACAAAAAGATTATAGTCGGCGTGGCCATGTACGGTCGAGGTTGGACCGGCGTCGGTG 62927
|| ||||| ||||||||||| || |||||||| || |||||||| || ||
Sbjct 503790 -----AAGAAGATAATAGTCGGCGTAGCTATGTACGGCCGTGGTTGGACAGGAGTTCAGA 503736
Query 62928 ACTTTGTCGACGAAAATAATCCATTTTCCGGCACGGCTAAGGGACCGATCAAAGGTACCT 62987
||| | || || ||||||||| | || | || | || || ||||||| | |
Sbjct 503735 ACT---ACACAGACAACAATCCATTTACTGGTAATGCCACAGGTCCCTGCAAAGGTTCTT 503679
Query 62988 GGGAGGACGGAGTCGTCGATTATAGAGAGATTTTTAATTCTTT---TGTGGGTAAAGACG 63044
|| | || || ||||| ||||||||||| ||| ||| | | || || | |
Sbjct 503678 GGCAAGATGGTGTCGTTGATTATAGAGACATTGCAAATGAGATAGCTCAAGGCAA--ATG 503621
Query 63045 GCATTAATCGTTACGATTCCATCGCAAAAGCGGCATACGTCTTTAATAAC-GCGACCGGC 63103
| | | | | |||||| | |||| ||||| | ||||| ||| | | | ||||| ||
Sbjct 503620 GGAGT-ACCATTACGACAACGTCGCCCAAGCGCCTTACGT-TTTCAGACCAGCGACTGGA 503563
Query 63104 GATCTCATAACCTACGACAGTCCTCAG-TCGGTTCTGGATAAAGCAAAATATGTTTTGGA 63162
|| | ||||| ||||| | | ||| || || | || || | || |||| | | |
Sbjct 503562 GACTTGATAACTTACGATGATGC-CAGATCAGTCATTGAGAAGGGGAAGTATG-TGAGAA 503505
Query 63163 CT-ATAATCTGGGTGGTCTGTTCGCGTGGGAGATCGATGCTGACAACGGATTGCTTCTAA 63221
| |||| | |||||||| ||||| ||||| || ||||| ||||| || | || |
Sbjct 503504 GTAATAAGTTAGGTGGTCTATTCGCTTGGGAAATAGATGCGGACAATGGCGATATACTCA 503445
Query 63222 ACGCAATGAA 63231
| ||||||||
Sbjct 503444 ATGCAATGAA 503435
>seq1196
Length=1288689
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
|| |||||| | || ||||||||| | || || || | |||||| | || | ||| |
Sbjct 730406 CACAATGCAGATCTTCGTAAAAACACTTACGGGGAAGACCATCACCCTTGAGGTGGAAGC 730347
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||||||| | || ||| || ||| || || ||||| || ||||| ||
Sbjct 730346 TTCTGACACCATCGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCTCCGGA 730287
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGAC 26942
|| || |||| || | || ||||||||||| ||||||| | | |||| |||
Sbjct 730286 CCAGCAGCGACTTATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACATTGTCA--GAC 730229
Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|| || |||||||| || || || | || |||| || ||| | |||||||| ||
Sbjct 730228 TACAATATTCAAAAGGAGTCCACCTTGCACTTGGTGCTAAGATTGAGAGGAGGTAA 730173
>seq1207
Length=6027761
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| | ||||||||| | ||||| | ||| ||||| ||
Sbjct 3526154 ATGCAGATATTCGTCAAAACTCTCACTGGAAAAACCATCACACTAGAAGTAGAACCATCT 3526095
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | |||||| || ||| |||||||| || || || || || ||
Sbjct 3526094 GACACAATAGAAAATGTCAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3526035
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | || | | ||||| ||| | ||||||| | | | | |||||||||
Sbjct 3526034 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTATAAC 3525975
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| || || || |||||| ||||||| |||||
Sbjct 3525974 ATCCAGAAGGAGTCTACTCTCCATCTAGTCCT 3525943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478618716072720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |