Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1527 356 2e-93
seq1207 109 5e-19
seq1889 104 2e-17
seq1196 104 2e-17
seq1346 86.0 5e-12
>seq1527
Length=671880
Score = 356 bits (394), Expect = 2e-93
Identities = 748/1091 (69%), Gaps = 37/1091 (3%)
Strand=Plus/Minus
Query 55722 GAAGTTGTAATCGCAGATACGGACGGTTCTCATCTTGCTCCGCTCTATTACGAATATCAG 55781
||| ||||| | || ||||| |||||| ||||| | ||||| | | | | ||| |
Sbjct 504714 GAAATTGTAGTAGCCGATACTGACGGTAGCCATCTCCCACCGCTAGACTTCTCA-ATCGG 504656
Query 55782 -GAATTAAATCAACCTTTCGAAACGCGAGTCGTG-GATAAAATCGTTGCCGCATATTTTG 55839
||| |||| |||| ||| | || || ||| | |||| | || | ||||||||| |
Sbjct 504655 AGAAAGAAATAAACCGTTCAA---GC-AGACGTCCGGTAAAGTGGTGGGCGCATATTTCG 504600
Query 55840 TCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACTCGAGTTCCCACTCCTAATCTGT 55899
||||||||||||| |||| || || || || || || || || | || ||| ||
Sbjct 504599 TCGAGTGGGGTGTATATCCGAGGAAGTTCCCAGTTGACCGTGTGCCAATCCCGAATTTGA 504540
Query 55900 CACACATTCTCTACGGATTCATACCGATATGCGGCGGCGACGGCATTAACGACAGTCTCA 55959
| || | || ||||||||||| || || || || || || || || ||||||||| | |
Sbjct 504539 CCCATTTGCTGTACGGATTCATCCCAATTTGTGGAGGTGATGGGATCAACGACAGTTTGA 504480
Query 55960 AGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCGGGTCGAGACGACTTCA 56019
| || || ||||| |||| | || |||||||| || || || |||||||
Sbjct 504479 AAGAAATCGAAGGCAGTTTCCAAGCTTTGCAACGATCGTGCAGTGGCCGGGAAGACTTCA 504420
Query 56020 AAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAAAAACAAGTGACCGCAT 56079
| || |||||||| ||||||||||| || |||| ||||| || || | || | |||
Sbjct 504419 AGGTTTCGATTCACGACCCGTGGGCCGCTCTCCAGAAGCCACAGAAGGGATTGTCTTCAT 504360
Query 56080 GGAACGAACCATACAAAGGCAACTTTGGACAATTGATGGCAGCTAAACTGGCGAATCCCC 56139
|||||||||| |||||||||||||||||||| |||||| |||| || || |||
Sbjct 504359 GGAACGAACCTTACAAAGGCAACTTTGGACAGTTGATGATGTTGAAACAAGCTAAACCCG 504300
Query 56140 ATGTTAAAGTGCTGCCTTCGATCGGTGGCTGGACTTTATCCGATCCGTTCTTTTACTTTC 56199
| | ||| | ||||||| |||||||| |||||||| | ||||| ||||| | | |||
Sbjct 504299 ACATGAAAATCTTGCCTTCCATCGGTGGGTGGACTTTGGCTGATCCCTTCTTCTTC-TTC 504241
Query 56200 AC-GATGCGGTCAAACGCAAAATTTTTGTCGATTCTGTCGTCGAGTTTTTACAGACCTGG 56258
|| || | || | | ||||| | ||| || || || | ||||||||
Sbjct 504240 ACTGACAAGTCTAAGAGAGACCGATTTGTAGCTTCAGTGAAGGACTTCCTCGAGACCTGG 504181
Query 56259 AAATTTTTCGATGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAGGGGGCCAATTCC 56318
|| || ||||| ||||| ||||||||||||||||| || ||||| || || ||||| |
Sbjct 504180 AAGTTCTTCGACGGTGTTGACATCGACTGGGAGTTCCCTGGCGGCAAAGGTGCCAACCCT 504121
Query 56319 AACGTCGGCGATGCCGAACGCGATCGCAACACGTACACGATTCTGTTACG--AGATTTAC 56376
||| | ||| | || | ||| | | ||| ||| || ||| | ||| | |
Sbjct 504120 AACCTTGGCAGTCCCAA---GGATGG--TGATGTATACGTGTCGCTTATGAAAGAACTTC 504066
Query 56377 GCGAAGCGCTAGACCGA---CTAAGCCTCGAAAC-GAATCGAACATACGAGCTAACCAGC 56432
| ||| | | || || | ||| ||||| | | ||| ||| ||||| ||
Sbjct 504065 GTGAAATG-TTGAATGAGCTGTCAGC--TGAAACTGGAAAGAA-ATATGAGCTGACTTCA 504010
Query 56433 GCCATTAGCGCCGGCGATGACAAAATCACGGTCGTCGACTACACAGCCGCTCAAAAATAT 56492
||||| |||||||| ||||||||| || || |||||| || || || |||||
Sbjct 504009 GCCATCAGCGCCGGTTGGGACAAAATCCAAGTGGTGAACTACAAAGAAGCCCAGAAATAC 503950
Query 56493 TTAGATTATAtttttttGATGACATACGATTTTAAAGGCGCTTGGTCGAATAGCGATCTG 56552
| ||| | ||||| || |||| || || || ||||| || |||||||| | | ||
Sbjct 503949 ATGGATCACATTTTCTTCATGAGTTATGACTTCAAAGGAGCCTGGTCGAACGACACTTTG 503890
Query 56553 GGCTATCAGACGACTTTGTACGCGCCTGCGTTTAATCCTAAAGAACAC-TATACGACCGA 56611
||| | ||||| | ||||||||||||||| || || |||| | || || ||||| ||
Sbjct 503889 GGCCACCAGACATCACTGTACGCGCCTGCGTGGAAACC-AAAGGAGACTTACACGACAGA 503831
Query 56612 TTTTGCGGTTCGTGCTCTGCTTAAACAAAAAGTCGAGAA---TAAAAAGATTGTAGTCGG 56668
||| | ||| ||| | | | | || ||| || ||||| |||||||
Sbjct 503830 TTTCGGAGTTAAATACCTGTT---AGCTCAGGGCGTGAACCCGAAGAAGATAATAGTCGG 503774
Query 56669 CGTAGCTATGTACGGTCGCGGGTGGACCGGCGTCGGTGATTTCGTCGACAAAAACAATCC 56728
||||||||||||||| || || ||||| || || | | | ||| ||||||||
Sbjct 503773 CGTAGCTATGTACGGCCGTGGTTGGACAGGAGTTCAGAACTACACAGAC---AACAATCC 503717
Query 56729 ATTTTCCGGCACGGCCA-AGGGACCTGTCAAAGGTACCTGGGAAGACGGAGTCGTTGATT 56787
|||| | || | |||| ||| |||| ||||||| | ||| |||| || ||||||||||
Sbjct 503716 ATTTACTGGTAATGCCACAGGTCCCTG-CAAAGGTTCTTGGCAAGATGGTGTCGTTGATT 503658
Query 56788 TTAGAGAAATT 56798
|||||| |||
Sbjct 503657 ATAGAGACATT 503647
>seq1207
Length=6027761
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || ||||| || |||||| | || ||| | ||||| ||| ||| |
Sbjct 2998023 ATGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAG-CCATC 2997965
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| ||||| | || || || ||| ||||| |||||||| || || || ||
Sbjct 2997964 AGACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 2997905
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| || |||| | || |||||||| | ||||| | | | | ||| || ||
Sbjct 2997904 GCAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACGCTTTCCGACTACAA 2997845
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||||||| || ||||| | |||||||| ||| | |||||||| |||
Sbjct 2997844 CATTCAAAAGGAGTCTACTCTACATTTAGTATTACGTTTGAGAGGTGGA 2997796
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
|||||||| | ||||| || ||||| || || || | |||||| | ||||| ||| |
Sbjct 2996688 AAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCCT 2996629
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
|| || || || | || ||| |||||| || ||||| || || ||||| |||
Sbjct 2996628 TCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGAT 2996569
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTA 24166
|| ||| ||||||| | || |||||||| | ||||| | || | || | ||||||
Sbjct 2996568 CAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACAC-TATCCGATTA 2996510
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| ||||| ||||||||||| ||||||| || ||
Sbjct 2996509 CAATATTCAGAAAGAATCTACCCTTCATTTGGTATT 2996474
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
|||||||| | ||||| || ||||| || || || | |||||| | ||||| ||| |
Sbjct 2998254 AAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCCT 2998195
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
|| || || || | || ||| |||||| || ||||| || || ||||| |||
Sbjct 2998194 TCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGAT 2998135
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTA 24166
|| ||| ||||||| | || |||||||| | ||||| | || | || | ||||||
Sbjct 2998134 CAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACAC-TATCCGATTA 2998076
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| ||||| ||||||||||| ||||||| || ||
Sbjct 2998075 CAATATTCAGAAAGAATCTACCCTTCATTTGGTATT 2998040
Score = 89.7 bits (98), Expect = 4e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| |||||||| ||| | || || | ||||| ||| ||| |
Sbjct 3525470 ATGCAGATATTTGTGAAAACTTTAACTGGTAAAACTATAACTTTAGAAGTTGAG-CCATC 3525412
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| || || | || ||| || ||| ||||| || || || ||||| || ||
Sbjct 3525411 TGACACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAGGAGGGTATCCCTCCAGACCA 3525352
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|||| | ||||| | || || || ||| | ||||| | | | | || ||||| ||
Sbjct 3525351 ACAGCGTCTGATCTTCGCTGGTAAACAATTGGAAGACGGACGCACCCTCTCTGATTACAA 3525292
Query 24170 CATTCAAAAAGAATCTAC 24187
||| ||||||||||| ||
Sbjct 3525291 CATACAAAAAGAATCCAC 3525274
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044
||||||||||| | || || || || || ||||| ||| | ||||| | ||||| ||
Sbjct 3528212 AACAAAATGCAGATTTTCGTTAAGACCTTGACTGGTAAAACCATTACATTGGAAGTTGAA 3528153
Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104
|| || || ||||| | || ||| || || |||||||||||||| || ||
Sbjct 3528152 CCCTCTGATACAATCGAAAACGTAAAAGCCAAAATCCAAGACAAAGAAGGCATTCCGCCT 3528093
Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164
||||| ||| | ||||| | || || || || | ||||| | | | | || |||
Sbjct 3528092 GATCAGCAGCGCCTGATCTTCGCTGGAAAACAGTTGGAAGACGGTCGCACCCTCTCCGAC 3528033
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200
|| || |||||||| ||||| || |||| || |||
Sbjct 3528032 TACAATATTCAAAAGGAATCAACCCTTCACTTGGTG 3527997
>seq1889
Length=140810
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
|||||||| | ||||| || ||||| || || || | |||||| | ||||| ||| |
Sbjct 27460 AAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCCT 27519
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
|| || || || | || ||| |||||| || ||||| || || ||||| |||
Sbjct 27520 TCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGAT 27579
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTA 24166
|| ||| ||||||| | || |||||||| | ||||| | || | || | ||||||
Sbjct 27580 CAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACAC-TATCCGATTA 27638
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| ||||| ||||||||||| ||||||| || ||
Sbjct 27639 CAATATTCAGAAAGAATCTACCCTTCATTTGGTATT 27674
>seq1196
Length=1288689
Score = 104 bits (114), Expect = 2e-17
Identities = 164/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|| |||||| | || ||||||||| | || || || | || ||| | || || || ||
Sbjct 730406 CACAATGCAGATCTTCGTAAAAACACTTACGGGGAAGACCATCACCCTTGAGGTGGAAGC 730347
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||||||||||| | || ||| || ||| || || ||||| || ||||| ||
Sbjct 730346 TTCTGACACCATCGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCTCCGGA 730287
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGAT 24164
|| ||| |||| || | || ||||| ||||| ||||||| | | | ||||| |
Sbjct 730286 CCAGCAGCGACTTATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACATTGTCAG--AC 730229
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || |||||||| || || || | || || ||| ||||||||||||||||
Sbjct 730228 TACAATATTCAAAAGGAGTCCACCTTGCACTTGGTGCTAAGATTGAGAGGAGG 730176
>seq1346
Length=947742
Score = 86.0 bits (94), Expect = 5e-12
Identities = 111/153 (73%), Gaps = 8/153 (5%)
Strand=Plus/Plus
Query 104911 TCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-GAGCCCCtttttttGT 104969
|||||||||||||| ||||| |||||| |||| | ||||| | ||||||| | ||
Sbjct 445070 TCATCTCTAGAAATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTT---- 445125
Query 104970 GTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGACACCTTCGACGATGGC 105029
|| | || |||||| ||| ||||| || ||||| |||| |||||||| ||
Sbjct 445126 ---CTTCAGCCAGAAGATGGAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGC 445182
Query 105030 AAACGCGACCATGCGTTCGGCGAATGTAGCAGT 105062
||| || || || ||||| | ||||| |||||
Sbjct 445183 AAAAGCCACAATTCGTTCTCCAAATGTGGCAGT 445215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429897743891655
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