Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1172 167 2e-36
seq1220 140 2e-28
seq1212 140 2e-28
seq1207 136 3e-27
seq1889 114 9e-21
seq1168 107 1e-18
seq1196 102 5e-17
>seq1172
Length=1933827
Score = 167 bits (184), Expect = 2e-36
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 6146 ATAAGTATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTA 6205
|| |||||| | || |||||| || ||||||| || || |||||||| |||||||||||
Sbjct 104038 ATTAGTATCAA--ACCATGGGGTCCGTGAACGTGAACCGCAATGTGGCCGACGCGTTCTA 103981
Query 6206 CCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAAC 6265
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| || || ||
Sbjct 103980 CCGCTACAAGATGCCGCGCATCTGCGCCAAGGTGGAGGGCAAGGGGAACGGCATCAAGAC 103921
Query 6266 CGTCATTGTCAACATGCCTGAAGTCGCTAAGGCG 6299
|||||||| |||||||| || || || ||||||
Sbjct 103920 TGTCATTGTGAACATGCCCGAGGTGGCCAAGGCG 103887
Score = 120 bits (132), Expect = 2e-22
Identities = 142/187 (76%), Gaps = 8/187 (4%)
Strand=Plus/Minus
Query 7170 CTGCTGTACGACCTAGACATAGTACAAGAGAAAACGATCATGGAGTGGTTCCACAAGCCG 7229
|||||||||||| ||||| || | ||||| ||||| |||||||| ||||||
Sbjct 76551 CTGCTGTACGACAACGACATCGTGGAGGAGAAGGCGATCCTGGAGTGGGCGTCGAAGCCG 76492
Query 7230 TCGTGCAAG-ACTCTCAGCAAAGAAGTGATGGCTGACGTGCACCGCCGCGCGCAGCCCTT 7288
||| ||||| || | |||||| || ||| |||| || |||| |||||||||||||||||
Sbjct 76491 TCGCGCAAGTACGC-CAGCAAGGAGGTGGTGGCCGAGGTGCGGCGCCGCGCGCAGCCCTT 76433
Query 7289 CCTGAACTGGCTGCAGCAAGCCGAGGATGATAGCAGCGAC-AGCGC--CGAGGAACTGGA 7345
|||| ||||||| | | |||||||| || ||||||| | ||| |||||| |||
Sbjct 76432 CCTGGACTGGCTCAACGACGCCGAGGAGGACTCCAGCGACGACCGCAGCGAGGA---GGA 76376
Query 7346 GATCGAG 7352
||||||
Sbjct 76375 CATCGAG 76369
Score = 120 bits (132), Expect = 2e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTG 6497
|| || |||||||| || || || | ||||||||| || ||||| || || || || ||
Sbjct 102579 TTCATCCGCAAGTTCGTACTCTGCCCGGAATGCGACAATCCGGAAACGGAACTCATAGTT 102520
Query 6498 TCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTG 6557
|| ||||| | ||||||||||| ||||||||||| || ||||||||||| || || ||
Sbjct 102519 TCAACCAAACGCAACACCATCTCCCAGGGCTGCAAGGCTTGCGGTTACCACGGGCAGTTG 102460
Query 6558 GATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601
|| || || || || ||||| || ||| ||||||| || ||
Sbjct 102459 GACTTCAACCATAAGCTGAACACGTTTATATTGAAGAACCCGCC 102416
Score = 93.3 bits (102), Expect = 3e-14
Identities = 136/191 (71%), Gaps = 11/191 (6%)
Strand=Plus/Minus
Query 6978 GTGAAATCAAAGGCGCCGCTGGTGCTTTTTGAGGTGCTGGTGCGTCCGGCCGCGCTGGCG 7037
||||| || ||||||||||||||| || |||||||||||||| || || |||||| |
Sbjct 93243 GTGAAGTCGAAGGCGCCGCTGGTGGCGTTCGAGGTGCTGGTGCGGCCCGCGTCGCTGG-G 93185
Query 7038 TGCG-ATGTGCGCAAGTACCGCGCGCTGTTGCTGCGCTTTACGCAACATGACCCGCGCGC 7096
||| | ||||| | ||||||||||| ||||||| | ||| || || |||||
Sbjct 93184 CGCGGACGTGCGGCGGCACCGCGCGCTGCTGCTGCGGCTGGCGCGCGCCGAGCCCCGCGC 93125
Query 7097 GCAACGCGCCGTTC---------TCACTGCGCTTTGTGTGCTCGACACTGCGCTGCTGCC 7147
|| ||||||| | |||| ||||| | || | || | |||||||||||
Sbjct 93124 ACAGCGCGCCGCGCTGCACGCCGTCACCGCGCTGGCCGCGCACCACCCCGCGCTGCTGCC 93065
Query 7148 CAAAGTGGCCG 7158
||| ||| |||
Sbjct 93064 CAAGGTGCCCG 93054
>seq1220
Length=2478420
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 869233 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 869292
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 869293 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 869327
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871608 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 871667
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 871668 GGTAATATTTAGCCTTA 871684
>seq1212
Length=986824
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 842107 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 842166
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 842167 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 842201
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844482 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 844541
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 844542 GGTAATATTTAGCCTTA 844558
>seq1207
Length=6027761
Score = 136 bits (150), Expect = 3e-27
Identities = 172/235 (73%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||||| |||||| ||||| || ||||||||||||||||| || ||
Sbjct 3527980 CCACCACGGAGACGCAGCACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAGTCGGAG 3528039
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| || |||| || || |||||||| || || || ||||| || ||||| | ||
Sbjct 3528040 AGGGTGCGACCGTCTTCCAACTGTTTTCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGA 3528099
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| |||||||||||| ||||| || || || | || ||||| |||||||
Sbjct 3528100 ATGCCTTCTTTGTCTTGGATTTTGGCTTTTACGTTTTCGATTGTATCAGAGGGTTCAACT 3528159
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT-TTAC 38324
|| |||||||| |||||||| |||||||| || ||||| |||||||| || ||||
Sbjct 3528160 TCCAATGTAATGGTTTTACCAGTCAAGGTCTTAACGAAAATCTGCATTTTGTTAC 3528214
Score = 122 bits (134), Expect = 6e-23
Identities = 167/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||||||||| || || ||||| ||||| |||||||||||| ||||| |
Sbjct 2997793 CATT-CCACCTCTCAAACGTAATACTAAATGTAGAGTAGACTCCTTTTGAATGTTGTAGT 2997851
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| || | ||| |||| || || || || || || || || | || || || || |
Sbjct 2997852 CGGAAAGCGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTG 2997911
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | |||||| ||||| |||||| ||| ||||| | || ||| ||| |
Sbjct 2997912 GGGGAATGCCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCT 2997971
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| |||||||| || || ||||| || ||||| || || ||||| || |||||
Sbjct 2997972 CTACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2998023
Score = 114 bits (126), Expect = 9e-21
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||||| ||||||||||| || || || |||||||||||||| |
Sbjct 2996457 TACCACCACGGAGGCGCAATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGG 2996516
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| |||| || || || || || || || || || || || ||||| | |
Sbjct 2996517 ATAGTGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAG 2996576
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| || ||||| || ||| || || ||||| | | |||||| | || |
Sbjct 2996577 GGATTCCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCTA 2996636
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|||| || |||||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 2996637 CTTCCAAGGTAATAGTCTTACCCGTCAATGTCTTCACAAAGATCTGCATTTTT 2996689
Score = 114 bits (126), Expect = 9e-21
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||||| ||||||||||| || || || |||||||||||||| |
Sbjct 2998023 TACCACCACGGAGGCGCAATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGG 2998082
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| |||| || || || || || || || || || || || ||||| | |
Sbjct 2998083 ATAGTGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAG 2998142
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| || ||||| || ||| || || ||||| | | |||||| | || |
Sbjct 2998143 GGATTCCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCTA 2998202
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|||| || |||||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 2998203 CTTCCAAGGTAATAGTCTTACCCGTCAATGTCTTCACAAAGATCTGCATTTTT 2998255
Score = 113 bits (124), Expect = 3e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146
||| ||||| | | ||| | ||||| || | ||| || ||||| || ||||||||
Sbjct 3525240 ATTTCCACCACGAAGACGGAGTACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTAATC 3525299
Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206
||| | ||| |||| || |||||||| || || || || || || ||||| || |
Sbjct 3525300 AGAGAGGGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAGATCAGACGCTGTTGGTCTGG 3525359
Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266
|||| || || |||||| |||||| || ||||| | | || || ||
Sbjct 3525360 AGGGATACCCTCCTTGTCCTGAATTTTGGCTTTAACATTTTCAATTGTGTCAGATGGCTC 3525419
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
||||||||| || ||||||||||| || || |||||||| ||||||||||||
Sbjct 3525420 AACTTCTAAAGTTATAGTTTTACCAGTTAAAGTTTTCACAAATATCTGCATG 3525471
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||||| ||||| |||||||| |||||||||||||||||||| ||
Sbjct 2996231 CCACCACGAAGACGCAGTACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCGGAA 2996290
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| ||| | || || || || || || || || || | || || || || | ||
Sbjct 2996291 AGCGTGCGTCCATCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGAGGA 2996350
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| |||||| ||||| |||||| ||| ||||| | || ||| ||| || |||
Sbjct 2996351 ATGCCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCTACT 2996410
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| || || ||||| || ||||| || || ||||| || |||||
Sbjct 2996411 TCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2996457
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || |||||||||||| ||||| || |||||||| || || || || |
Sbjct 3526154 TACCACCACGCAGACGCAACACCAAGTGAAGGGTTGATTCCTTTTGGATGTTATAGTCTG 3526213
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | || | || || || || ||||||||||| || | || || || || | ||
Sbjct 3526214 AGAGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGG 3526273
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||| ||| ||| || || ||||||| | || || | ||||
Sbjct 3526274 GAATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTCTCAATGGTGTCAGAAGGCTCAA 3526333
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|||| | ||| |||||||| || || | ||||| ||||| |||||||||
Sbjct 3526334 CTTCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3526383
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || |||||||||||| |||||||| ||||| || || || || || |
Sbjct 3527294 TACCACCACGCAGACGCAACACCAAGTGAAGAGTCGATTCCTTCTGGATGTTATAGTCTG 3527353
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | || | || || || || ||||||||||| || | || || || || | ||
Sbjct 3527354 AGAGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGG 3527413
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||| ||| ||| || || ||||| | | || || | ||||
Sbjct 3527414 GAATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGAAGGCTCAA 3527473
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|||| | ||| |||||||| || || | ||||| ||||| |||||||||
Sbjct 3527474 CTTCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3527523
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||| | || | ||| ||||| |||||| || || ||||| ||||||
Sbjct 3527068 CCACCACGGAGACGAAGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3527127
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
|| || | || || ||||| || || ||||| || | || || || || | |||
Sbjct 3527128 AAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 3527187
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || ||||||||| |||||| || ||||| | | || || ||| |||
Sbjct 3527188 ATTCCCTCTTTGTCCTGAATTTTAGCTTTAACATTTTCTATTGTGTCAGATGGTTCTACT 3527247
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| ||| || ||||| || || | ||||| ||||||||||||||
Sbjct 3527248 TCTAGTGTGATGGTTTTTCCAGTGAGAGTTTTGACGAATATCTGCAT 3527294
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||| | || | ||| ||||| |||||| || || || || ||||||
Sbjct 3525928 CCACCACGAAGACGAAGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTATAGTCAGAC 3525987
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
|| || | || || ||||| || || ||||| || | || || || || | |||
Sbjct 3525988 AAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 3526047
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || ||||||||| |||||| || ||||| | | || || ||| |||
Sbjct 3526048 ATTCCCTCTTTGTCCTGAATTTTAGCTTTGACATTTTCTATTGTGTCAGATGGTTCTACT 3526107
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| ||| || ||||| || || | ||||| ||||||||||||||
Sbjct 3526108 TCTAGTGTGATGGTTTTTCCAGTGAGAGTTTTGACGAATATCTGCAT 3526154
Score = 82.4 bits (90), Expect = 5e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222
|| || || || || || || || || | || || || || | ||| | |||||| |||
Sbjct 2997641 TCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTG 2997700
Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282
|| |||||| |||||| || | | ||| ||| || |||||||| ||||||
Sbjct 2997701 TCTTGAATTTTAGCCTTCACGTTTTCAATAGTGTCTGATGGCTCTACTTCTAAAGTAATA 2997760
Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| |||||||| || |||||||| || |||||
Sbjct 2997761 GTTTTTCCCGTCAATGTCTTCACGAAAATTTGCAT 2997795
>seq1889
Length=140810
Score = 114 bits (126), Expect = 9e-21
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||||| ||||||||||| || || || |||||||||||||| |
Sbjct 27691 TACCACCACGGAGGCGCAATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGG 27632
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| |||| || || || || || || || || || || || ||||| | |
Sbjct 27631 ATAGTGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAG 27572
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| || ||||| || ||| || || ||||| | | |||||| | || |
Sbjct 27571 GGATTCCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCTA 27512
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|||| || |||||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 27511 CTTCCAAGGTAATAGTCTTACCCGTCAATGTCTTCACAAAGATCTGCATTTTT 27459
>seq1168
Length=7897672
Score = 107 bits (118), Expect = 1e-18
Identities = 158/220 (72%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 74013 GACTGGCCTGCG-AGTATGACACAAAAACCTTTGGAGCTTGCTGAGGCGGGATTTTATTA 74071
|||||||| ||| || ||| | ||||| || || | ||||| || || ||||||||
Sbjct 2386364 GACTGGCC-GCGTAGCATGCCCCAAAAGCCGGAAGATTTAGCTGAAGCCGGTTTTTATTA 2386422
Query 74072 TACGAATAAAGGCGACAGAACAAAGTGCTACTATTGTGACAATGGTTTAAAAGATTGGGA 74131
|| ||||||||| || ||||| ||||| |||||| || | |||||||||||
Sbjct 2386423 CACCGGCCAAGGCGACAAGACTAAGTGTTACTACTGTGACGGAGGCCTGAAAGATTGGGA 2386482
Query 74132 ACCCGAAGATGTGCCCTGGGAACAACACGCTCGTTGGTTTGACAAATGTGAATTTGTTAA 74191
| || ||||| || ||||| || |||||||||||||||||| ||| | | ||| |
Sbjct 2386483 AAAAGACGATGTACCGTGGGAGCAGCACGCTCGTTGGTTTGACCGTTGTTATTATGTATA 2386542
Query 74192 AATTGTAAAAG---GCGATCAGTATGTGCAAAAGGTTATA 74228
|||| |||| ||||| ||| | |||||||| ||
Sbjct 2386543 CCTTGTTAAAGGACGCGAT---TATATAAAAAAGGTTTTA 2386579
>seq1196
Length=1288689
Score = 102 bits (112), Expect = 5e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146
|||||| |||||||| | | |||||| || | ||| |||||||||||||||||| ||
Sbjct 730172 ATTACCTCCTCTCAATCTTAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTC 730231
Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206
||||| || | || || | |||||| || || || || || || || || || |
Sbjct 730232 TGACAATGTGCGGCCATCTTCCAGTTGTTTGCCAGCGAAGATAAGTCGCTGCTGGTCCGG 730291
Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266
|||| ||||| || || |||||| |||||||| | || || || | |||
Sbjct 730292 AGGGATACCTTCCTTATCTTGAATTTTGGCTTTCACATTTTCGATGGTGTCAGAAGCTTC 730351
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | || || || || ||||| | ||||| ||||| ||||||||
Sbjct 730352 CACCTCAAGGGTGATGGTCTTCCCCGTAAGTGTTTTTACGAAGATCTGCAT 730402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334917396084131
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |