Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq1527 318 6e-82
seq2599 91.5 2e-13
>seq1527
Length=671880
Score = 318 bits (352), Expect = 6e-82
Identities = 596/868 (69%), Gaps = 11/868 (1%)
Strand=Plus/Plus
Query 51575 CCAGCCGCGAGCGTACATCGCCACGCCGACGACGATCTTCTGATTGCGCACGCCCTGTTC 51634
||| || || ||||||| || |||||||| | ||||||| | ||||||||| |
Sbjct 503749 CCAACCACGGCCGTACATAGCTACGCCGACTATTATCTTCTTCGGGTTCACGCCCTGAGC 503808
Query 51635 GAGAAGCGACGACACGGCATAGTCGGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGCGC 51694
| || | || | | || || ||||| | || | || ||||| |||||
Sbjct 503809 TAACAGGTATTTAACTCCGAAATCTGTCGTGTAAGTCTCCTTTGGTTTCCACGCAGGCGC 503868
Query 51695 GAACAGTGTGGTCTGGTAGCCCAGATCGGTGTTGGACCACGCACCCTTGAAATCGTAGTT 51754
| |||||| ||||||| ||||| | | ||| ||||| || || ||||| || || |
Sbjct 503869 GTACAGTGATGTCTGGTGGCCCAAAGTGTCGTTCGACCAGGCTCCTTTGAAGTCATAACT 503928
Query 51755 CATGAGGAAAATGTAATCCAACTGCGTCTGCGCCCGAGCGTAGTCGACGACTTGAATTTT 51814
||||| |||||||| ||||| | |||| || ||||| || ||||| |||||
Sbjct 503929 CATGAAGAAAATGTGATCCATGTATTTCTGGGCTTCTTTGTAGTTCACCACTTGGATTTT 503988
Query 51815 ATCGTAGCCCGCGCTGATGGCGCTGGTCAACAGGTACGAACGGTTC-GTGGCGGCGCTCA 51873
|| | || ||||||||||| |||| | || | | | || | || ||
Sbjct 503989 GTCCCAACCGGCGCTGATGGCTGAAGTCAGCTCATATTT-CTTTCCAGTTTCAGCTGACA 504047
Query 51874 ACTCGTCGAGCATGTCGCGCAGCTCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGAT 51933
||| | | ||| || || || || ||| ||||| |||||| ||||||| |
Sbjct 504048 GCTCATTCAACATTTCACGAAGTTCTTTCATAAGCGACACGTATACATCACCATCC---T 504104
Query 51934 CGGGATCGCCCAGGTCGGGATTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGA 51993
|||| ||| |||| || ||||| ||||||||||| || ||||||||||||| ||| |
Sbjct 504105 TGGGACTGCCAAGGTTAGGGTTGGCACCTTTGCCGCCAGGGAACTCCCAGTCGATGTCAA 504164
Query 51994 CTCCGTCGAAGAACTTCCAAGTCAGCAGAAACTCGCGAACCGATTCGACGAA--GGTTGC 52051
| ||||||||||||||||| ||| || || || || || | || || ||| |
Sbjct 504165 CACCGTCGAAGAACTTCCAGGTCTCGAGGAAGTCCTTCACTGAAGCTACAAATCGGTCTC 504224
Query 52052 GCGTTTGCTCGCGTC-GTGCAGGAAGAAGAACGGATCGGACAGCGTCCAACCGCCGATCG 52110
| | || | || ||| || |||||||| ||||| | || ||||| || ||||| |
Sbjct 504225 TCTTAGACTTG--TCAGTGAAG-AAGAAGAAGGGATCAGCCAAAGTCCACCCACCGATGG 504281
Query 52111 AGGGCAGAATCTTGAGCGAAGGATTGGCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTC 52170
| |||| || || | || || || |||| | ||||| |||||||||||| |
Sbjct 504282 AAGGCAAGATTTTCATGTCGGGTTTAGCTTGTTTCAACATCATCAACTGTCCAAAGTTGC 504341
Query 52171 CCTTGTACGGATCGTTCCAGGCCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGG 52230
| ||||| || |||||||| | || | || ||||| || ||||| || || ||||| |
Sbjct 504342 CTTTGTAAGGTTCGTTCCATGAAGACAATCCCTTCTGTGGCTTCTGGAGAGCGGCCCACG 504401
Query 52231 GATCGTGAATCGTCACCTTAAAGTCCGACCTGCCCACGCACGACCGTTGCAACGCTTCGA 52290
| |||||||||| ||||| ||||| || ||| |||||| |||||||| |||| ||
Sbjct 504402 GGTCGTGAATCGAAACCTTGAAGTCTTCCCGGCCACTGCACGATCGTTGCAAAGCTTGGA 504461
Query 52291 AACTGTTGTCGATCGGTTTCAGGCTGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGA 52350
||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||
Sbjct 504462 AACTGCCTTCGATTTCTTTCAAACTGTCGTTGATCCCATCACCTCCACAAATTGGGATGA 504521
Query 52351 AGCCGTACAGCAGATGCGACAGGTTCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCA 52410
| |||||||||| ||| | || ||||| | ||||| | || || || || || | |
Sbjct 504522 ATCCGTACAGCAAATGGGTCAAATTCGGGATTGGCACACGGTCAACTGGGAACTTCCTCG 504581
Query 52411 AGTAAACGCCCCATTCGACAAAGTAGGC 52438
|| || ||||| ||||| || || ||
Sbjct 504582 GATATACACCCCACTCGACGAAATATGC 504609
>seq2599
Length=163288
Score = 91.5 bits (100), Expect = 2e-13
Identities = 108/143 (76%), Gaps = 4/143 (3%)
Strand=Plus/Minus
Query 127543 GCACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCGGGGGA 127602
|||||| || ||||||||||||||||| |||| | ||||| ||||| ||||||||||
Sbjct 63476 GCACGGTTTCCACGTGCACGAGTTCGGGGACAACACAAACGGCTGCACCTCGGCGGGGGC 63417
Query 127603 ACACTTCAATCCCACCG--GTATGGATCACGGAGCGCCCAACGCGCTCGTTCGTCACGTT 127660
|||||||| ||| | | | || || |||||||| || | || || | ||| ||
Sbjct 63416 TCACTTCAA-CCCCCTGAAGAAT-GACCACGGAGCACCAGATGCTACAGTGAGACACATT 63359
Query 127661 GGCGACCTGGGCAACGTGGAGGC 127683
|| ||||| |||||| | |||||
Sbjct 63358 GGAGACCTTGGCAACATCGAGGC 63336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537554136987960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |