Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1329 95.1 2e-14 seq1598 93.3 9e-14 seq1282 91.5 3e-13 seq1229 91.5 3e-13 seq1220 91.5 3e-13 seq1202 91.5 3e-13 seq1168 91.5 3e-13 seq2460 89.7 1e-12 seq2241 89.7 1e-12 seq2231 89.7 1e-12 seq1227 89.7 1e-12 >seq1329 Length=2137515 Score = 95.1 bits (104), Expect = 2e-14 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 142041 CATTAAACGCAT-GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGT 142099 ||||| ||| || ||| |||||||||| ||| ||||||||||||||||||||||||||| Sbjct 852095 CATTACACGTATCGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGT 852154 Query 142100 TGCGGGTTCGACCCCCGCCAGAGACGC 142126 | |||||||| |||| |||| || || Sbjct 852155 CGTGGGTTCGATCCCCACCAGGGATGC 852181 >seq1598 Length=574329 Score = 93.3 bits (102), Expect = 9e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 117536 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 117477 Query 142563 CCCCACATCGGGCAGAAGT 142581 |||||| | |||| |||| Sbjct 117476 CCCCACGTTGGGCGTAAGT 117458 >seq1282 Length=2341812 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 341431 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 341372 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 341371 CCCCACGTTGGGC 341359 >seq1229 Length=1833543 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 455179 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 455120 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 455119 CCCCACGTTGGGC 455107 >seq1220 Length=2478420 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 807467 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 807408 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 807407 CCCCACGTTGGGC 807395 >seq1202 Length=3018337 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 576958 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 577017 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 577018 CCCCACGTTGGGC 577030 >seq1168 Length=7897672 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1247396 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1247337 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1247336 CCCCACGTTGGGC 1247324 >seq2460 Length=65152 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 48979 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 49038 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 49039 CCCACGTTGGGC 49050 >seq2241 Length=79579 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 69820 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 69879 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 69880 CCCACGTTGGGC 69891 >seq2231 Length=81345 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 17049 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 16990 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 16989 CCCACGTTGGGC 16978 >seq1227 Length=736714 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 104825 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 104766 Query 142113 CCCGCCAGAGACGC 142126 ||| |||| || || Sbjct 104765 CCCACCAGGGATGC 104752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027740651970141