Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1329 95.1 2e-14
seq1598 93.3 9e-14
seq1282 91.5 3e-13
seq1229 91.5 3e-13
seq1220 91.5 3e-13
seq1202 91.5 3e-13
seq1168 91.5 3e-13
seq2460 89.7 1e-12
seq2241 89.7 1e-12
seq2231 89.7 1e-12
seq1227 89.7 1e-12
>seq1329
Length=2137515
Score = 95.1 bits (104), Expect = 2e-14
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 142041 CATTAAACGCAT-GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGT 142099
||||| ||| || ||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct 852095 CATTACACGTATCGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGT 852154
Query 142100 TGCGGGTTCGACCCCCGCCAGAGACGC 142126
| |||||||| |||| |||| || ||
Sbjct 852155 CGTGGGTTCGATCCCCACCAGGGATGC 852181
>seq1598
Length=574329
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 117536 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 117477
Query 142563 CCCCACATCGGGCAGAAGT 142581
|||||| | |||| ||||
Sbjct 117476 CCCCACGTTGGGCGTAAGT 117458
>seq1282
Length=2341812
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 341431 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 341372
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 341371 CCCCACGTTGGGC 341359
>seq1229
Length=1833543
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 455179 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 455120
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 455119 CCCCACGTTGGGC 455107
>seq1220
Length=2478420
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 807467 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 807408
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 807407 CCCCACGTTGGGC 807395
>seq1202
Length=3018337
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 576958 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 577017
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 577018 CCCCACGTTGGGC 577030
>seq1168
Length=7897672
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1247396 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1247337
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1247336 CCCCACGTTGGGC 1247324
>seq2460
Length=65152
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 48979 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 49038
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 49039 CCCACGTTGGGC 49050
>seq2241
Length=79579
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 69820 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 69879
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 69880 CCCACGTTGGGC 69891
>seq2231
Length=81345
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 17049 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 16990
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 16989 CCCACGTTGGGC 16978
>seq1227
Length=736714
Score = 89.7 bits (98), Expect = 1e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 104825 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 104766
Query 142113 CCCGCCAGAGACGC 142126
||| |||| || ||
Sbjct 104765 CCCACCAGGGATGC 104752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027740651970141
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |