Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1251 104 3e-17 >seq1251 Length=5235866 Score = 104 bits (114), Expect = 3e-17 Identities = 249/375 (66%), Gaps = 9/375 (2%) Strand=Plus/Minus Query 114280 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 114339 |||| ||| || | ||||| ||||||| ||||| || | || |||||||| || || Sbjct 3095651 AAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCCTCATATTTGATTT 3095592 Query 114340 TCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399 | | || ||| ||||| |||| ||| |||| |||||||||| | ||| || Sbjct 3095591 TTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTAGATTCTGGGTAAC 3095532 Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGAC 114456 | |||||||| || | ||| ||| |||| | || ||| | | ||||| || Sbjct 3095531 TATCTTTGTGACCTCTTTAAG--TTTGGTAA----AGTTGTAAGTTTTGTCATCATTCAC 3095478 Query 114457 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 114516 | || | | || || || || | ||||| || | || ||||| | || || Sbjct 3095477 AAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCAGATGTATA 3095418 Query 114517 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 114576 ||| | |||||| || ||||| || || ||||| ||||| | || || ||||| Sbjct 3095417 CTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCTGATTACT 3095358 Query 114577 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 114636 ||| | ||||| ||||||||||| | ||| ||||| || || || || ||| | | Sbjct 3095357 CTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTACTTGTGCTTC 3095298 Query 114637 GAGAATAGCCTTCCA 114651 | |||||| ||||| Sbjct 3095297 AATAATAGCTTTCCA 3095283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597299084017080