Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1251 107 2e-18 >seq1251 Length=5235866 Score = 107 bits (118), Expect = 2e-18 Identities = 250/375 (67%), Gaps = 9/375 (2%) Strand=Plus/Minus Query 116241 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 116300 |||| ||| || | ||||| ||||||| ||||| || | || |||||||| || || Sbjct 3095651 AAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCCTCATATTTGATTT 3095592 Query 116301 TCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 116360 | | || ||| ||||| |||| ||| |||| |||||||||| | ||| || Sbjct 3095591 TTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTAGATTCTGGGTAAC 3095532 Query 116361 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGAC 116417 | |||||||| || | ||| ||| |||| | || ||| | | ||||| || Sbjct 3095531 TATCTTTGTGACCTCTTTAAG--TTTGGTAA----AGTTGTAAGTTTTGTCATCATTCAC 3095478 Query 116418 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 116477 | || | | || || || || | ||||| || | || ||||| | || || Sbjct 3095477 AAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCAGATGTATA 3095418 Query 116478 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 116537 ||| | |||||| || ||||| || || ||||| ||||| | || || ||||| Sbjct 3095417 CTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCTGATTACT 3095358 Query 116538 CTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTT 116597 ||| | ||||| ||||||||||| | ||||||||| || || || || ||| | | Sbjct 3095357 CTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTACTTGTGCTTC 3095298 Query 116598 GAGAATAGCCTTCCA 116612 | |||||| ||||| Sbjct 3095297 AATAATAGCTTTCCA 3095283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613451209799160