Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1251 98.7 2e-15 >seq1251 Length=5235866 Score = 98.7 bits (108), Expect = 2e-15 Identities = 172/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 203830 AACCTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATA 203889 |||||| |||| ||||| || || ||||| || || |||||||| | ||| ||||| Sbjct 3096386 AACCTTGCTCTTATCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATA 3096327 Query 203890 GTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCT 203949 ||||| || || || || ||| | | ||| | || | ||| || |||| ||||| | Sbjct 3096326 ATACATTCCAGTTTTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCC 3096267 Query 203950 CACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCG 204009 || || || || | || || || | ||||||||||| || ||||| | | | Sbjct 3096266 ATAATTTGGCTCAGCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCT 3096207 Query 204010 ATCTGCGGCCATATTGATAATGGTC-TTCTGC--GAAATCTCCCACACCGTCTTGAACAC 204066 ||||| ||||| |||| ||||| || || ||||||||||| || || ||| ||| Sbjct 3096206 GTCTGCCGCCAT-TTGA--ATGGTAGTTTTGACTGAAATCTCCCAAACAGTTTTGTACAA 3096150 Query 204067 GTCTCT 204072 |||||| Sbjct 3096149 GTCTCT 3096144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795082632148560