Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq1527 187 2e-42
seq1207 109 4e-19
seq1196 86.0 4e-12
>seq1527
Length=671880
Score = 187 bits (206), Expect = 2e-42
Identities = 791/1234 (64%), Gaps = 34/1234 (3%)
Strand=Plus/Plus
Query 5832 TTCATTGCATTTAAAAGATCACCGTTGTCCGCGTCTATTTCCCACGCAAATAAACCACCC 5891
||||||||||| | | ||| || |||||||| ||||||||||| || |||| ||||||
Sbjct 503435 TTCATTGCATTGAGTATATCGCCATTGTCCGCATCTATTTCCCAAGCGAATAGACCACCT 503494
Query 5892 AAATTTTTGCTCACTACATACTTACCTTTTGCTACCACCGATTGATCGTTGTCGTACGTA 5951
|| || || || |||||||| || || | | || ||| | | ||||| ||
Sbjct 503495 AACTTATTACTTCTCACATACTTCCCCTTCTCAATGACTGATCTGGCATCATCGTAAGTT 503554
Query 5952 ACTAAATCATTATTATC------GTAGACGTACGGAGATTGTGCAATGTTATCATAGAAT 6005
| || || | | | | | ||||| || | ||| || | ||| || || ||
Sbjct 503555 ATCAAGTCTCCAGTCGCTGGTCTGAAAACGTAAGGCGCTTGGGCGACGTTGTCGTA--AT 503612
Query 6006 TGTACAC----TTTCGTCG---TACCT-ATTTACAATATCTTTATAATCGATTACGCCGC 6057
|||| | || | | | || || |||| |||| ||| ||||||| | || ||
Sbjct 503613 GGTACTCCCATTTGCCTTGAGCTATCTCATTTGCAATGTCTCTATAATCAACGACACCAT 503672
Query 6058 TTTCCCATGTACCTTTAACGGGAGCGCTAGCTATTCCTGTAAACGGATTATTGTTTTCGA 6117
|| ||| | |||||| |||| | | || | || ||||| ||||| |||| | |
Sbjct 503673 CTTGCCAAGAACCTTTGCAGGGACCTGTGGCATTACCAGTAAATGGATTGTTGTCTGTGT 503732
Query 6118 CTCGATGCACACCGCTCCAGCCGCGTCCATACATAGCCACACCTACTACTAATTTAGTCG 6177
|| || || |||| || || || |||||||| || || |||| || || |||
Sbjct 503733 AGTTCTGAACTCCTGTCCAACCACGGCCGTACATAGCTACGCCGACTATTATCTTCTTCG 503792
Query 6178 AATCGACATTTTGATTTAACAATCTGTTAATAGCAAAATGGGTTGTGTAATTTTCGTTAA 6237
| || ||| ||||| |||| | |||| || |||||| | || ||
Sbjct 503793 GGTTCACGCCCTGAGCTAACAGGTATTTAACTCCGAAATCTGTCGTGTAAGTCTCCTTTG 503852
Query 6238 CGTCCCACGAAGGAGCGTAAAGCGGTGTTTGAAAACCCAAATTTTCCATGGACCAAGCGC 6297
| ||||| ||| ||||| || | ||| || |||||| | || | ||||| || |
Sbjct 503853 GTTTCCACGCAGGCGCGTACAGTGATGTCTGGTGGCCCAAAGTGTCGTTCGACCAGGCTC 503912
Query 6298 CTTTAAAATCGTAGGTCATTACAAATATATAATCGAGATAGCGTTGCGCGTCTGTATAAT 6357
|||| || || || |||| | || || | ||| | || || || ||| | || |
Sbjct 503913 CTTTGAAGTCATAACTCATGAAGAAAATGTGATCCATGTATTTCTGGGCTTCTTTGTAGT 503972
Query 6358 CGACAACGTCGATTTTGTCGTAACCGGCACCGATAGCGCTAGTTAGTTGCAATCGTTTAC 6417
|| || | ||||||||| ||||||| | ||| || ||| || | || || |
Sbjct 503973 TCACCACTTGGATTTTGTCCCAACCGGCGCTGATGGCTGAAGTCAGCTCATATTTCTTTC 504032
Query 6418 CTCTCtttttttCCAATTTGTTGAGCATTTCGCGTAACTCCTTTAAAAGTATTGTATATG 6477
| | | | || | || | |||||| || | || || | ||| |||
Sbjct 504033 CAGTTTCAGCTGACAGCTCATTCAACATTTCACGAAGTTCTTTCATAAGCGACACGTATA 504092
Query 6478 TTTTGCGATCCACTGAAGCGTTGCCCAGCGACGGGTTGGCACCTTTACCGCCCGGAAACT 6537
| | |||| | | |||| || |||||||||||||| ||||| || ||||
Sbjct 504093 CATCACCATCCTTGGGAC---TGCCAAGGTTAGGGTTGGCACCTTTGCCGCCAGGGAACT 504149
Query 6538 CCCAATCTATGTCGACGCCGTCGAAAAATTTCCACGTTTCCAAAAATTCGCGCACACTAT 6597
|||| || ||||| || |||||||| || ||||| || || | || || ||| |
Sbjct 504150 CCCAGTCGATGTCAACACCGTCGAAGAACTTCCAGGTCTCGAGGAAGTCCTTCACTGAAG 504209
Query 6598 CAACAAACGTATTTCGTTTTTCGAC--GTCGTTTAACTGGTAAAACGGATC-GCTAAGCG 6654
| ||||| | || | || ||| ||| | || | | || ||||| || || |
Sbjct 504210 CTACAAATCGGTCTC--TCTTAGACTTGTCAGTGAAGAAGAAGAAGGGATCAGCCAAA-G 504266
Query 6655 TCCATCCGCCTATCGATGGCAATATTGTTAAATCTGGATTGTGGCGCTTGATCGCCATTA 6714
|||| || || || || ||||| ||| | | || || || | || | | ||| |
Sbjct 504267 TCCACCCACCGATGGAAGGCAAGATTTTCATGTCGGGTTTAGCTTGTTTCAACATCATCA 504326
Query 6715 ACTGTCCAAAGTTTCCTTTGTACGGTTCGTTGTAGGCCTCGACA--CCTTTTTGTGGTTT 6772
||||||||||||| |||||||| |||||||| | | |||| || || ||||| ||
Sbjct 504327 ACTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCATGAA--GACAATCCCTTCTGTGGCTT 504384
Query 6773 TTGAAGCGCTCCCCATATATCATGAATGGTTACTTTGAAATCTTTTCGGCCGGCGCACGA 6832
|| || || |||| || ||||| | || ||||| |||| ||||| ||||||
Sbjct 504385 CTGGAGAGCGGCCCACGGGTCGTGAATCGAAACCTTGAAGTCTTCCCGGCCACTGCACGA 504444
Query 6833 TTTTTGCAACGCCTC-AAACGAACTGGGTATTTGTTGTTTAAGCGCATCGTTTACACCAT 6891
| |||||| || | |||| || | |||| || | || | ||||| | ||||
Sbjct 504445 TCGTTGCAAAGCTTGGAAACTGCCTTCG-ATTTCTT--TCAAACTG-TCGTTGATCCCAT 504500
Query 6892 CGCCGCCACAAATTGGTATAAACCCGTACAACAAATGTGTAAGATTAGGAATGGGAATTT 6951
| || ||||||||||| || || ||||||| |||||| || | ||| || || || |
Sbjct 504501 CACCTCCACAAATTGGGATGAATCCGTACAGCAAATGGGTCAAATTCGGGATTGGCACAC 504560
Query 6952 TGTCGGCGGGATATTGTCTATCGTAAACACCCCATTCCACAAAGTAAGCGCCCACAACAT 7011
||| | || | | || || |||||||| || || || || |||||||| || |
Sbjct 504561 GGTCAACTGGGAACTTCCTCGGATATACACCCCACTCGACGAAATATGCGCCCACCACTT 504620
Query 7012 TATCGGTAATTTTTTCGAACGGTACATTGTTTTC 7045
|| ||| | | | ||||||| ||| ||||
Sbjct 504621 TACCGGACGTCTGCTTGAACGGTTTATTTCTTTC 504654
>seq1207
Length=6027761
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| |||||||| ||||| ||| |||||||||||| || ||||| |
Sbjct 3525244 CCACCACGAAGACGGAGTACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTAATCAGAG 3525303
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| |||| | || ||||||||||| || | || || | |||||| || || | ||
Sbjct 3525304 AGGGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAGATCAGACGCTGTTGGTCTGGAGGG 3525363
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || || ||||| ||||| ||||| | | | |||||| | || ||
Sbjct 3525364 ATACCCTCCTTGTCCTGAATTTTGGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACT 3525423
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| ||||| || |||||||| ||||||||||| || || |||||||||
Sbjct 3525424 TCTAAAGTTATAGTTTTACCAGTTAAAGTTTTCACAAATATCTGCATG 3525471
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | ||| || || | ||| | ||| || || || || || || || |
Sbjct 3527751 GCCACCACGGAGACGAAGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3527810
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
||| ||| |||| |||||||| || || |||| || ||||||||||| || | |||
Sbjct 3527811 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 3527870
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| || |||||||| |||||| ||| | || | | ||||||| |||||
Sbjct 3527871 AATTCCCTCTTTGTCCTGAATTTTTGCTTTGACATTCTCAATGGTGTCTGAAGGCTCCAC 3527930
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | || || ||||| || || | ||||||||||||||||||||||
Sbjct 3527931 TTCAAGTGTGATGGTTTTCCCAGTGAGAGTTTTTACGAAGATCTGCATG 3527979
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | |||||| ||||| || | || ||| ||||| ||||| || ||||
Sbjct 3527979 GCCACCACGGAGACGCAGCACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAGTCGGA 3528038
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
| ||| | || ||||| ||||| || | || || | ||||||||||| | ||
Sbjct 3528039 GAGGGTGCGACCGTCTTCCAACTGTTTTCCAGCGAAGATCAGGCGCTGCTGATCAGGCGG 3528098
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| |||||||||||| ||||| ||| | | | | ||| || | | ||| ||
Sbjct 3528099 AATGCCTTCTTTGTCTTGGATTTTGGCTTTTACGTTTTCGATTGTATCAGAGGGTTCAAC 3528158
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| ||||| |||||||| || || || || ||||| ||||||||
Sbjct 3528159 TTCCAATGTAATGGTTTTACCAGTCAAGGTCTTAACGAAAATCTGCAT 3528206
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | |||||||||||| || | ||| ||| ||||| ||||| |||||||
Sbjct 2996231 CCACCACGAAGACGCAGTACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCGG-- 2996288
Query 39553 AAAAC--GCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610
||| | |||| |||| ||||| || || || | || || || |||||||| || | |
Sbjct 2996289 AAAGCGTGCGTCCATCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGAG 2996348
Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTA--ATCGTCGCTACTGTGTCTGCGCTTTC 39668
| | |||||| ||||| ||||| ||| || ||| || ||||||| ||
Sbjct 2996349 GAATGCCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCGATA--GTGTCTGATGGCTC 2996406
Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || || || ||||| || || || || || ||||| || |||||
Sbjct 2996407 TACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2996457
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | ||| || || | ||| | ||| || || || || ||||| || |
Sbjct 3525927 GCCACCACGAAGACGAAGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTATAGTCAGA 3525986
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
||| ||| |||| |||||||| || || |||| || ||||||||||| || | |||
Sbjct 3525987 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 3526046
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| || |||||||| ||||| ||| | | ||| |||||| | ||| ||
Sbjct 3526047 AATTCCCTCTTTGTCCTGAATTTTAGCTTTGACATTTTCTATTGTGTCAGATGGTTCTAC 3526106
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || || ||||| || || | |||||| ||||| ||||||||
Sbjct 3526107 TTCTAGTGTGATGGTTTTTCCAGTGAGAGTTTTGACGAATATCTGCAT 3526154
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | ||| || || | ||| | ||| || || || || || || || |
Sbjct 3527067 GCCACCACGGAGACGAAGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3527126
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
||| ||| |||| |||||||| || || |||| || ||||||||||| || | |||
Sbjct 3527127 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 3527186
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| || |||||||| ||||| ||||| | ||| |||||| | ||| ||
Sbjct 3527187 AATTCCCTCTTTGTCCTGAATTTTAGCTTTAACATTTTCTATTGTGTCAGATGGTTCTAC 3527246
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || || ||||| || || | |||||| ||||| ||||||||
Sbjct 3527247 TTCTAGTGTGATGGTTTTTCCAGTGAGAGTTTTGACGAATATCTGCAT 3527294
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || ||||| ||||| ||||| || | || || ||||| |||||||| || |
Sbjct 3525699 GCCACCACGCAAGCGCAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTATAGTCTGA 3525758
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
| | ||| |||| ||||| || || || | || || ||||||||||| || | |||
Sbjct 3525759 GAGAGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 3525818
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| || |||||||| ||||| ||||| || | | ||||| | ||||||
Sbjct 3525819 AATTCCCTCTTTGTCCTGAATTTTAGCTTTAACATTCTCGATGGTGTCAGAAGGTTCCAC 3525878
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | || || ||||| || || | || || || || |||||||||
Sbjct 3525879 TTCAAGTGTGATGGTTTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3525927
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || |||| ||||| ||||| || | || ||| ||||| || ||||| || |
Sbjct 3526156 CCACCACGCAGACGCAACACCAAGTGAAGGGTTGATTCCTTTTGGATGTTATAGTCTGAG 3526215
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | ||| |||| ||||| || || ||| |||| || ||||||||||| || | |||
Sbjct 3526216 AGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGA 3526275
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || ||||| || || || ||| | || | | ||||| | || ||
Sbjct 3526276 ATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTCTCAATGGTGTCAGAAGGCTCAACT 3526335
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | || || ||||| || || | |||||| |||||||||||||||
Sbjct 3526336 TCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3526383
>seq1196
Length=1288689
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | || ||||| ||||| ||| || ||||| ||||| || || | |
Sbjct 730176 CCTCCTCTCAATCTTAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCTGAC 730235
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| ||| |||| |||| |||||| || | || || | |||||||| |||| ||
Sbjct 730236 AATGTGCGGCCATCTTCCAGTTGTTTGCCAGCGAAGATAAGTCGCTGCTGGTCCGGAGGG 730295
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| || || ||||| ||| | | | | ||||| | ||||||
Sbjct 730296 ATACCTTCCTTATCTTGAATTTTGGCTTTCACATTTTCGATGGTGTCAGAAGCTTCCACC 730355
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || || || || ||||| | ||||||||||||||||||||
Sbjct 730356 TCAAGGGTGATGGTCTTCCCCGTAAGTGTTTTTACGAAGATCTGCAT 730402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347338690727333
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