Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1251 150 2e-31 >seq1251 Length=5235866 Score = 150 bits (166), Expect = 2e-31 Identities = 1103/1752 (63%), Gaps = 48/1752 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||||| ||| | || | ||||| || ||||| |||||| ||||| | | Sbjct 3094614 CCGCAGCATATGTTAATGAGAGTTTCTATCGGAATACATGGTGAAGATGTTGATGCCGCC 3094673 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | |||||||| | | || | ||| |||| || || | ||||| || || Sbjct 3094674 ATTCAGACATACAATTTATTATCTGAGAAATAT-TTCACTCATGCGAGTCCAACTCTTTT 3094732 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||| || || ||||| || |||| ||||| ||| |||| | | || || Sbjct 3094733 TGCTGCTGCCACCCCTAGACCACAGTTGTCTTCATGTTTTCTTGTTGCTATGAGAGATGA 3094792 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || || | |||| | | | ||||| ||||| || | ||||| Sbjct 3094793 CAGCATTGAGGGGATATATGACACTTTGAAACAGTGTGCTTTGATCTCTAAATCAGCTGG 3094852 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 |||||| || | || | || | |||||||| || | | || || || ||| Sbjct 3094853 TGGTATTGGTGTTCATGTGCACTGCATTAGAGCCAA--AGGCACCTACATTGCTGGAACA 3094910 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 |||||| ||| ||||||| | || ||| | || || | || ||| || | ||| Sbjct 3094911 AATGGTGTCTCAAATGGTATAGTGCCTATGTTGCGTGTTTACAATAACACTGCCAGATAT 3094970 Query 111969 GTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 || |||||| || | || ||| || ||||||| ||| | || || ||||| Sbjct 3094971 GTGGACCAAGGCGGCAATAAACGGCCGGGCGCTTTCGCAGTGTATTTAGAACCCTGGCAT 3095030 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || ||||| | ||||| || || || || || ||| | ||||| | || ||| Sbjct 3095031 GCTGATATATTCGAGTTTCTAGATTTAAAAAAGAATCATGGTAAAGAGGAAGTACG-TGC 3095089 Query 112086 C-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 | || ||||| | || || |||||||||||| | || ||||| | ||||| | | Sbjct 3095090 AAGAGAACTCTTTTATGCACTGTGGATTCCAGATTTATTTATGAAACGTGTTGAAAAAAA 3095149 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 || ||||| | | | || || | | | || ||| | ||||| | |||||| Sbjct 3095150 TGAAGATTGGAGTATTATGTGCCCTCATGATTCTCCAGGTTTAGCCGATTGCTGGGGTGA 3095209 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGA---GGAAGAAAGTCGGGCGACTGCGACGGT 112261 |||||||| || | || ||| || || |||| || || | || | | || Sbjct 3095210 AGAGTTTGAGGCTTTGTATGAAAAATATGAACAGGAAAAACGTTATGTGAAA-CAA--GT 3095266 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 ||| | ||| |||||||||||||| | | | ||| || ||||| ||||||| Sbjct 3095267 CAAAGCA-CAGATACTGTGGAAAGCTATTATTGAAGCACAAGTAGAAACTGGAACACCAT 3095325 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| | ||||| || |||||||| ||||||||||| || ||| | || || | Sbjct 3095326 ATATGTTATACAAGGATGCCTGTAATAGGAAGAGTAATCAGAAAAATCTAGGCACAATTA 3095385 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 | || |||| | || |||||||| | || | |||| |||||| || || || | Sbjct 3095386 AATGTAGCAACTTGTGCACAGAAATTGTTGAGTATACATCTGCAGATGAAACAGCAGTTT 3095445 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTGAT 112499 ||||| | ||||| || ||| | || || |||| || || |||||| || | | Sbjct 3095446 GTAACTTAGCATCTATTGCTTTGAACATGTTTGTGAAT---GATGACAAA-ACTTACAAC 3095501 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | | ||||| | || || || || | || || | || ||||| | | |||||||| Sbjct 3095502 TTTACCAAACTTAAAGAGGTCACAAAGATAGTTACCCAGAATCTAAATAAAATTATTGAT 3095561 Query 112560 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 |||| || || || ||| || | ||||| |||||||| ||| | || ||| Sbjct 3095562 GTCAATTACTATCCAGTGCCTGA---AGCCCAAAAATCAAATATGAGGCACAGACCTATT 3095618 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 112676 || ||||||| ||||| | || ||| ||| | | ||| ||| ||| Sbjct 3095619 GGAATCGGTGTACAAGGATTAGCAGATACATTTGTATTAATGCGCATACCATATGAAAGT 3095678 Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAG 112736 || || | || | || | |||||||| || || ||| ||| ||| | ||| Sbjct 3095679 GAAACTGCTATCAAACTGAACCAACAAATATTTGAAACTATTTATTACGGAGCTTTAGAG 3095738 Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796 || |||| || |||||||| |||| ||||| || | | | ||| ||| | Sbjct 3095739 GCAAGTTGTGAATTGGCAGAAAAATATGGGGTGTATGAGACATATCATGGTAGTCCTG-- 3095796 Query 112797 TCA--CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGAC 112853 ||| || ||| | | |||| ||| |||| |||| | |||| | || ||| Sbjct 3095797 TCAGTCAGGGGATATTACAATATGAGATGT-GGAACAAAACTCCAACAGACCTCTGGGAC 3095855 Query 112854 TGGGACGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911 ||| | || | || || || ||| | | || ||||| || || | | | Sbjct 3095856 TGGCAGGCATTGAAAGACAAAATTGCAA--AACATGGACTTCGCAATTCACTACTAGTAG 3095913 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971 | || ||||| || || || || |||||||| | || || ||||||| ||||| || | Sbjct 3095914 CTCCTATGCCTACTGCTTCAACAGCACAAATACTTGGAAACAATGAATCTTTTGAGCCTT 3095973 Query 112972 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 113031 ||| | || || || | ||| | | | ||||| || ||||||| | | Sbjct 3095974 TCACATCTAATATTTACCAAAGACGTGTATTATCAGGAGAATTCCAAGTTGTCAATCATC 3096033 Query 113032 ATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGG 113091 | | || ||| | | ||| || || ||| | |||||||| ||||||| Sbjct 3096034 ACTTATTGCGTGATTTAACAGAAGCTGAGCTATGGGATGAAGATATGAAAAATCTCATTA 3096093 Query 113092 TGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGA-AGTTG 113150 | | ||| || ||||||||||||| ||||| | || | ||||| | ||| Sbjct 3096094 TTCATAATAATGGATCAATTCAAAATATTGAAACCATTCCCAAAGATA-TAAGAGACTTG 3096152 Query 113151 TACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 113210 ||| || |||||||| || | || | |||| | ||||| ||||| | ||| Sbjct 3096153 TACAAAACTGTTTGGGAGATTTCAGTCAAAACTACCATTCAAATGGCGGCAGACAGAGGT 3096212 Query 113211 CGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA---AAGTCCAACGATGTCC 113267 ||||| |||||||| || | || ||| |||| | || | || ||| Sbjct 3096213 GCATTCATAGATCAAAGCCAGTCATTTAA--TATACATGTAGCTGAGCCAAATTATG-GA 3096269 Query 113268 AAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 || || ||||||| ||| | || |||||| | |||||||||||| || |||||||| Sbjct 3096270 AAACTAACTTCTATACACTTTTATGCTTGGAAAATGGGTCTCAAAACTGGAATGTATTAT 3096329 Query 113328 CTCCGATCTAAG 113339 || ||| | ||| Sbjct 3096330 CTACGAACAAAG 3096341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620685749496720