Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1251 178 2e-39 >seq1251 Length=5235866 Score = 178 bits (196), Expect = 2e-39 Identities = 788/1226 (64%), Gaps = 40/1226 (3%) Strand=Plus/Minus Query 106096 CCACATATCAAATTGAAGCACCCCTTGG--GACGTGGGAGAACCCTCAAATGTCTCATAG 106153 |||||| ||| |||| | | ||| || ||| ||| ||| | | |||||||||| Sbjct 3095828 CCACATCTCATATTGTAATATCCCCTGACTGACA--GGACTACCATGATATGTCTCATAC 3095771 Query 106154 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 || | ||| ||||||||||| || ||||| | | | ||| ||| || |||||| Sbjct 3095770 ACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAATAAATAGTTTCA 3095711 Query 106214 AAGATACGAGCATTCATCTCCTTGGC---TTCATCTGAATCAAATGCGTAGCGGCACAAA 106270 || || | |||| | | || |||| | ||| ||| ||| ||| || Sbjct 3095710 AATATTTGTTGGTTCAGTTTGATAGCAGTTTCACTT---TCATATG-GTATGCGCATTAA 3095655 Query 106271 -ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 106329 | |||| ||| || | ||||| ||||| | |||||||||||||| | |||||| || Sbjct 3095654 TACAAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCCTCATATTTGA 3095595 Query 106330 CTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 106386 ||| | || ||| || ||||| |||| ||||| | | |||||||| | Sbjct 3095594 TTTTTGGGCT---TCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTAGATTCTG 3095538 Query 106387 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 106446 |||||| |||||||||| || | |||||| | | | |||| | || ||||| Sbjct 3095537 GGTAACTATCTTTGTGACCTCTTTAAGTTTGGTAAAGTTGTAAGTTT---TGTCATCATT 3095481 Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 ||| || | | || || ||||| || || ||||| || || ||||| | ||| Sbjct 3095480 CACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCAGATGT 3095421 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 ||||| | ||||||||| ||||||||| || ||||| || || | ||| || || || Sbjct 3095420 ATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCTGATT 3095361 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||| | || || ||||||||||| | ||| || || || || || || |||| Sbjct 3095360 ACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTACTTGTGC 3095301 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGC---CCGTCCCT 106682 | | ||| || ||||||| ||| | ||| || || || | ||| | Sbjct 3095300 TTCAATAATAGCTTTCCACAGTATCTG-TGCTTTGAC-TTG--TTTCACATAACGTTTTT 3095245 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCT 106741 || || || ||| || | || |||||||| |||||| | || |||| | |||| Sbjct 3095244 CCTGTTCATATTTTTCATACAAAGCCTCAAACTCTTCACCC-CAGCAATCGGCTAAACCT 3095186 Query 106742 GGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAA 106801 || | | | || || | || | ||| | || | ||||| || ||||| || Sbjct 3095185 GGAGAATCATGAGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTTCATAAAT 3095126 Query 106802 AGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGG 106861 | |||||||||||||| | ||||||| ||||| || | || || | ||| || Sbjct 3095125 AAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACCATGA 3095066 Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921 || | ||| || || ||||| | ||||| || ||||| || || | ||| |||||| Sbjct 3095065 TTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACACTGCG 3095006 Query 106922 ATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 106978 | || ||| || | || |||| | ||||| | || ||| || | || Sbjct 3095005 AAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGTAAACA 3094946 Query 106979 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTAT 107036 || | ||| || | ||||||| ||| ||||||||| || || || | | | | Sbjct 3094945 CGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGCCT--T 3094888 Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096 ||||||| | || | || | |||||||| ||||| | || ||||| |||| Sbjct 3094887 TGGCTCTAATGCAGTGCACATGAACACCAATACCACCAGCTGATTTAGAGATCAAAGCAC 3094828 Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156 ||| | | ||| |||| || || | || ||| || | | || | ||| || | Sbjct 3094827 ACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAGAAAAC 3094768 Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 | |||| ||| ||||| || || ||||| || || ||||| | || ||| ||| Sbjct 3094767 ATGAAGACAACTGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATGAGTGA 3094708 Query 107217 ACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 | ||| | | || | | |||||||| | | | | ||||| ||||| || || Sbjct 3094707 A-ATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCACCATGT 3094649 Query 107276 ATGCCGATGGCCACACGCATAAACAT 107301 || ||||| | || | ||| ||||| Sbjct 3094648 ATTCCGATAGAAACTCTCATTAACAT 3094623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589926956877240