Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1346 118 2e-21
seq1657 91.5 3e-13
>seq1346
Length=947742
Score = 118 bits (130), Expect = 2e-21
Identities = 124/163 (76%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||||||||||| || ||||| || ||||| ||||||||||| || || || || ||
Sbjct 446282 GTACATCTCAGAATGTACATTTTCCATAGCAATCTGGAACCCATAAAAAAATCTAGCTTC 446341
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
||| || || ||| |||||||| || | || || ||||||||||| ||||||||
Sbjct 446342 TGTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGGTTTTCATTGACTATTCCATCTGA 446401
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCG 48586
|| || || || ||||| |||||||| | |||||| || |||
Sbjct 446402 CGCTGCGAAAAATGCAAGCACATGTTTGATGAAATGTCGTTCG 446444
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247
|| |||||||||| |||||||| || |||||||| || | |||||| ||| ||||||
Sbjct 445103 AGCCCAGGCATGAGCCCCCTCTTCTTCAGCCAGAAGATGGAAGCGAAACTGCCCGAGAAG 445162
Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307
|||||||| || ||||| || || || | | ||||| || | || |||||
Sbjct 445163 AAGATGCCTTCGACTGCTGCAAAAGCCACAATTCGTTCTCCAAATGTGGCAGTCTTGCTG 445222
Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
| |||||| | |||||||| ||||||||||| | ||| |||| ||||| |||||
Sbjct 445223 GCGATCCACTGCAATGCCCAGTCGGCCTTCTTCTTCACGCAGGGCAGGGTCTCAATGGC 445281
>seq1657
Length=449815
Score = 91.5 bits (100), Expect = 3e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537
||||| || ||| || | ||||||||| |||||||| | ||| ||||| | ||
Sbjct 99008 GCGTTCTCGCCCTTCAGGATCTTCACTTTGTCCTCCAGTTTAGAGATACGTTCTAACTTT 98949
Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597
||||| |||||||||| || |||| ||||||| | ||||| || ||| ||||||
Sbjct 98948 CGCCGCCGGCATTTGGACGCGGCCACTCGGTTCCTTTGCCTCTTCCGCTCCAGCTTGATA 98889
Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
|| ||||| ||||||||||| || |||
Sbjct 98888 CGCTCCTGAGTGTCCATGTCGATGGGTGAC 98859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931447785987840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |