Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1346 118 2e-21 seq1657 91.5 3e-13 >seq1346 Length=947742 Score = 118 bits (130), Expect = 2e-21 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||||||||| || ||||| || ||||| ||||||||||| || || || || || Sbjct 446282 GTACATCTCAGAATGTACATTTTCCATAGCAATCTGGAACCCATAAAAAAATCTAGCTTC 446341 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||| || || ||| |||||||| || | || || ||||||||||| |||||||| Sbjct 446342 TGTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGGTTTTCATTGACTATTCCATCTGA 446401 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCG 48586 || || || || ||||| |||||||| | |||||| || ||| Sbjct 446402 CGCTGCGAAAAATGCAAGCACATGTTTGATGAAATGTCGTTCG 446444 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 || |||||||||| |||||||| || |||||||| || | |||||| ||| |||||| Sbjct 445103 AGCCCAGGCATGAGCCCCCTCTTCTTCAGCCAGAAGATGGAAGCGAAACTGCCCGAGAAG 445162 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307 |||||||| || ||||| || || || | | ||||| || | || ||||| Sbjct 445163 AAGATGCCTTCGACTGCTGCAAAAGCCACAATTCGTTCTCCAAATGTGGCAGTCTTGCTG 445222 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 | |||||| | |||||||| ||||||||||| | ||| |||| ||||| ||||| Sbjct 445223 GCGATCCACTGCAATGCCCAGTCGGCCTTCTTCTTCACGCAGGGCAGGGTCTCAATGGC 445281 >seq1657 Length=449815 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 ||||| || ||| || | ||||||||| |||||||| | ||| ||||| | || Sbjct 99008 GCGTTCTCGCCCTTCAGGATCTTCACTTTGTCCTCCAGTTTAGAGATACGTTCTAACTTT 98949 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 ||||| |||||||||| || |||| ||||||| | ||||| || ||| |||||| Sbjct 98948 CGCCGCCGGCATTTGGACGCGGCCACTCGGTTCCTTTGCCTCTTCCGCTCCAGCTTGATA 98889 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || ||||| ||||||||||| || ||| Sbjct 98888 CGCTCCTGAGTGTCCATGTCGATGGGTGAC 98859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931447785987840