Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1346 104 4e-17 >seq1346 Length=947742 Score = 104 bits (114), Expect = 4e-17 Identities = 143/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 ||||| |||||| ||| | | ||| || | |||| |||||| ||||| || || Sbjct 445290 CTGTTCAATGCCATTGAGACCCTGCCCTGCGTGAAGAAGAAGGCCGACTGGGCATTGCAG 445231 Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 |||||| |||| ||| || || ||||| || || | || || ||||| || || || Sbjct 445230 TGGATCGCCAGCAAGACTGCCACATTTGGAGAACGAATTGTGGCTTTTGCAGCAGTCGAA 445171 Query 25906 GGCATCTTTTTCAGCGGTTCGTTT-GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCAT 25964 |||||||| ||| ||| |||| || ||||||||||||| ||| ||| |||| ||| Sbjct 445170 GGCATCTTCTTCT-CGGGCAGTTTCGCTTCCATCTTCTGGCTGAAGAAGAGGGGGCTCAT 445112 Query 25965 GCCCGGGCTGTACTTT 25980 ||| ||||| |||||| Sbjct 445111 GCCTGGGCT-TACTTT 445097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928760031301440