Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 185 4e-42
>seq1251
Length=5235866
Score = 185 bits (204), Expect = 4e-42
Identities = 284/405 (70%), Gaps = 0/405 (0%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
|||||| |||||| ||||| | ||||||||||||||||||||||| |||||||||
Sbjct 3095159 CCAATCTTCATTTTTTTCAACACGTTTCATAAATAAATCTGGAATCCACAGTGCATAAAA 3095100
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
| ||||| || | | ||| ||||| || ||||||||||||| ||||| || || ||
Sbjct 3095099 GAGTTCTCTTGCACGTACTTCCTCTTTACCATGATTCTTTTTTAAATCTAGAAACTCGAA 3095040
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
||||| | ||||| ||||||||||| | || ||| || | ||| || ||
Sbjct 3095039 TATATCAGCATGCCAGGGTTCTAAATACACTGCGAAAGCGCCCGGCCGTTTATTGCCGCC 3094980
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
||| || || ||||| ||||| | |||| |||| |||||| || |||| ||| ||||
Sbjct 3094979 TTGGTCCACATATCTGGCAGTGTTATTGTAAACACGCAACATAGGCACTATACCATTTGA 3094920
Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205
| || ||||| | | ||| | || ||| | | |||||| ||| |||||| |||
Sbjct 3094919 GACACCATTTGTTCCAGCAATGTAGGTGCCTTTGGCTCTAATGCAGTGCACATGAACACC 3094860
Query 26206 GATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTT 26265
|| |||||||| |||| || || ||||| | | | || || | || || |
Sbjct 3094859 AATACCACCAGCTGATTTAGAGATCAAAGCACACTGTTTCAAAGTGTCATATATCCCCTC 3094800
Query 26266 TATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310
||||| ||| || |||| | | | |||||| ||||| || ||
Sbjct 3094799 AATGCTGTCATCTCTCATAGCAACAAGAAAACATGAAGACAACTG 3094755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253017484263575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |