Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1251 185 4e-42 >seq1251 Length=5235866 Score = 185 bits (204), Expect = 4e-42 Identities = 284/405 (70%), Gaps = 0/405 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||||| |||||| ||||| | ||||||||||||||||||||||| ||||||||| Sbjct 3095159 CCAATCTTCATTTTTTTCAACACGTTTCATAAATAAATCTGGAATCCACAGTGCATAAAA 3095100 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||||| || | | ||| ||||| || ||||||||||||| ||||| || || || Sbjct 3095099 GAGTTCTCTTGCACGTACTTCCTCTTTACCATGATTCTTTTTTAAATCTAGAAACTCGAA 3095040 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 ||||| | ||||| ||||||||||| | || ||| || | ||| || || Sbjct 3095039 TATATCAGCATGCCAGGGTTCTAAATACACTGCGAAAGCGCCCGGCCGTTTATTGCCGCC 3094980 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 ||| || || ||||| ||||| | |||| |||| |||||| || |||| ||| |||| Sbjct 3094979 TTGGTCCACATATCTGGCAGTGTTATTGTAAACACGCAACATAGGCACTATACCATTTGA 3094920 Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205 | || ||||| | | ||| | || ||| | | |||||| ||| |||||| ||| Sbjct 3094919 GACACCATTTGTTCCAGCAATGTAGGTGCCTTTGGCTCTAATGCAGTGCACATGAACACC 3094860 Query 26206 GATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTT 26265 || |||||||| |||| || || ||||| | | | || || | || || | Sbjct 3094859 AATACCACCAGCTGATTTAGAGATCAAAGCACACTGTTTCAAAGTGTCATATATCCCCTC 3094800 Query 26266 TATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310 ||||| ||| || |||| | | | |||||| ||||| || || Sbjct 3094799 AATGCTGTCATCTCTCATAGCAACAAGAAAACATGAAGACAACTG 3094755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253017484263575