Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1251 224 1e-53 >seq1251 Length=5235866 Score = 224 bits (248), Expect = 1e-53 Identities = 1120/1755 (64%), Gaps = 54/1755 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||||| ||| | || | ||||| || || || ||||| ||||| | | | Sbjct 3094614 CCGCAGCATATGTTAATGAGAGTTTCTATCGGAATACATGGTGAAGATGTTGATGCCGCC 3094673 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | |||||||| | | || | | ||| |||| ||| || | ||||| || || Sbjct 3094674 ATTCAGACATACAATTTATTATCTGAGAAATAT-TTCACTCATGCGAGTCCAACTCTTTT 3094732 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||| || || ||||| ||| |||| || || ||| | || | | || || Sbjct 3094733 TGCTGCTGCCACCCCTAGACCACAGTTGTCTTCATGTTTTCTTGTTGCTATGAGAGATGA 3094792 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| ||| | | ||||||| ||||| || | ||||| Sbjct 3094793 CAGCATTGAGGGGATATATGACACTTTGAAACAGTGTGCTTTGATCTCTAAATCAGCTGG 3094852 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACA 75508 |||||||| | || | || | |||||||| | | | || || || ||| Sbjct 3094853 TGGTATTGGTGTTCATGTGCACTGCATTAGAGCCAA--AGGCACCTACATTGCTGGAACA 3094910 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 |||||| ||| ||||||| | || ||| | || || | || ||| || | ||| Sbjct 3094911 AATGGTGTCTCAAATGGTATAGTGCCTATGTTGCGTGTTTACAATAACACTGCCAGATAT 3094970 Query 75569 GTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 || | |||| || | || ||| | |||| || || || ||||| |||||| Sbjct 3094971 GTGGACCAAGGCGGCAATAAACGGCCGGGCGCTTTCGCAGTGTATTTAGAACCCTGGCAT 3095030 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 || ||||| | ||||| || || ||| | || || ||| | || || | || Sbjct 3095031 GCTGATATATTCGAGTTTCTAGATTTAAAAAAGAATCATGGTAAAGAGGAAGTACGTGCA 3095090 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 ||||| ||||||| | |||||||||||||| | || ||||| || ||||| | | Sbjct 3095091 AGAGAACTCTTTTATGCACTGTGGATTCCAGATTTATTTATGAAACGTGTTGAAAAAAAT 3095150 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGA 75804 | | ||| | || | || || | | | |||||| | |||| || | |||||| Sbjct 3095151 GAAGATTGGAGTATTATGTGCCCTCATGATTCTCCAGGTTTAGCCGATTGCTG-GGGTGA 3095209 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA-- 75862 |||||||| || | || ||| |||||| |||| | | ||| || | Sbjct 3095210 AGAGTTTGAGGCTTTGTATGAAAAATATGAACAGGAA---AAACGTTATGTGAAACAAGT 3095266 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | | | | ||| | ||||| |||||| | || |||| || |||||||||||||| Sbjct 3095267 CAAAGCACAGATACTGTGGAAAGCTATTATTGAAGCACAAGTAGAAACTGGAACACCATA 3095326 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||| | ||||||||||| ||||| | ||||||||| || || ||| | || ||||| || Sbjct 3095327 TATGTTATACAAGGATGCCTGTAATAGGAAGAGTAATCAGAAAAATCTAGGCACAATTAA 3095386 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || | ||||| |||||| | ||||| ||| | ||||| || || ||||| Sbjct 3095387 ATGTAGCAACTTGTGCACAGAAATTGTTGAGTATACATCTGCAGATGAAACAGCAGTTTG 3095446 Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTA 76101 || || ||||| || || | | || ||| ||||| || | |||| | | Sbjct 3095447 TAACTTAGCATCTATTGCTTTGAACATGTTTGTGAATGATGACA---AAACTTACAACTT 3095503 Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161 | |||||| | || |||||||||| |||||| | |||||||| | | ||||| Sbjct 3095504 TACCAAACTTAAAGAGGTCACAAAGATAGTTACCCAGAATCTAAATAAAATTATTGATGT 3095563 Query 76162 AAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGG 76218 |||| ||||| || ||| || | ||| || |||||| | |||||||||||||| Sbjct 3095564 CAATTACTATCCAGTGCCTGA---AGCCCAAAAATCAAATATGAGGCACAGACCTATTGG 3095620 Query 76219 TTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAG 76277 | ||||| ||||| | || ||| |||| | || ||| ||| ||| ||| | Sbjct 3095621 AATCGGTGTACAAGGATTAGCAGATACATTTGTATTAATGCGCATAC-CATATGA---AA 3095676 Query 76278 ATGAA---GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334 |||| || | | |||| | || |||||||| || ||| ||| | | | | Sbjct 3095677 GTGAAACTGCTATCAAACTGAACCAACAAATATTTGAAACTATTTATTACGGAGCTTTAG 3095736 Query 76335 AGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG 76394 |||| |||||||||||||| ||| | || |||||||||| | | ||| ||| | Sbjct 3095737 AGGCAAGTTGTGAATTGGCAGAAAAATATGGGGTGTATGAGACATATCATGGTAGTCCTG 3095796 Query 76395 CGTCCCAAGGGGTGCTTCAGTTTGATATGTGG---GAAGGTGAAACCAAGCTCAACTACG 76451 || ||| | | || | ||| |||||| || | ||| | || || | Sbjct 3095797 TCAGTCAGGGGATATTACAATATGAGATGTGGAACAAAACTCCAACAGACCT---CTGGG 3095853 Query 76452 ACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509 ||||| | | | || || || ||| | | || ||||| || || | | Sbjct 3095854 ACTGGCAGGCATTGAAAGACAAAATTGCAA--AACATGGACTTCGCAATTCACTACTAGT 3095911 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 || || ||||| || || || || |||||||| | || || ||||||| ||||| || Sbjct 3095912 AGCTCCTATGCCTACTGCTTCAACAGCACAAATACTTGGAAACAATGAATCTTTTGAGCC 3095971 Query 76570 ATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAA 76629 | |||| | || || |||| ||| | | |||| || || ||||||| | Sbjct 3095972 TTTCACATCTAATATTTACCAAAGACGTGTATTATCAGGAGAATTCCAAGTTGTCAATCA 3096031 Query 76630 GCACCTCGTCAATGACCTCA-AGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 76688 ||| | | ||| | | ||||| || || ||| | |||||||| |||||| Sbjct 3096032 TCACTTATTGCGTGATTTAACAGAAG-CTGAGCTATGGGATGAAGATATGAAAAATCTCA 3096090 Query 76689 TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA-AT 76747 | | | ||| || ||||||||||| | || || | ||||| |||| | Sbjct 3096091 TTATTCATAATAATGGATCAATTCAAAATATTGAAACCATTCCCAAAGATAT-AAGAGAC 3096149 Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807 | ||| || || ||||| || | ||| | |||| | ||||| ||||| | Sbjct 3096150 TTGTACAAAACTGTTTGGGAGATTTCAGTCAAAACTACCATTCAAATGGCGGCAGACAGA 3096209 Query 76808 GGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA---AAGTCCAACGATG 76864 ||| ||||| |||||||| || | || ||| |||| | || | || ||| Sbjct 3096210 GGTGCATTCATAGATCAAAGCCAGTCATTTAA--TATACATGTAGCTGAGCCAAATTATG 3096267 Query 76865 TCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTAC 76924 || || ||||||| || | || || |||||| ||| |||||||| |||||||| Sbjct 3096268 -GAAAACTAACTTCTATACACTTTTATGCTTGGAAAATGGGTCTCAAAACTGGAATGTAT 3096326 Query 76925 TATCTCCGATCAAAG 76939 ||||| ||| ||||| Sbjct 3096327 TATCTACGAACAAAG 3096341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596515155566880