Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1889 122 1e-22
seq1207 122 1e-22
seq1346 116 5e-21
>seq1889
Length=140810
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|||||||| || ||| | || |||||||| || || |||||||| || ||||| || |
Sbjct 27460 AAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCCT 27519
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||||| |||| ||| || ||| ||| || ||||||||||| || || ||||| ||
Sbjct 27520 TCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGAT 27579
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| || || |||| | || || |||||| | ||||| | || |||| |||||
Sbjct 27580 CAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATCCGATTAC 27639
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
||||| ||||| | || |||||||| || ||
Sbjct 27640 AATATTCAGAAAGAATCTACCCTTCATTTGGTATT 27674
>seq1207
Length=6027761
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|||||||| || ||| | || |||||||| || || |||||||| || ||||| || |
Sbjct 2996688 AAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCCT 2996629
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||||| |||| ||| || ||| ||| || ||||||||||| || || ||||| ||
Sbjct 2996628 TCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGAT 2996569
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| || || |||| | || || |||||| | ||||| | || |||| |||||
Sbjct 2996568 CAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATCCGATTAC 2996509
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
||||| ||||| | || |||||||| || ||
Sbjct 2996508 AATATTCAGAAAGAATCTACCCTTCATTTGGTATT 2996474
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|||||||| || ||| | || |||||||| || || |||||||| || ||||| || |
Sbjct 2998254 AAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCCT 2998195
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||||| |||| ||| || ||| ||| || ||||||||||| || || ||||| ||
Sbjct 2998194 TCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGAT 2998135
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| || || |||| | || || |||||| | ||||| | || |||| |||||
Sbjct 2998134 CAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATCCGATTAC 2998075
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
||||| ||||| | || |||||||| || ||
Sbjct 2998074 AATATTCAGAAAGAATCTACCCTTCATTTGGTATT 2998040
Score = 120 bits (132), Expect = 4e-22
Identities = 120/156 (77%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | || |||||||| |||||||||||||| |||||||| || ||
Sbjct 2997796 AATGCAAATTTTCGTGAAGACATTGACGGGAAAAACTATTACTTTAGAAGTAGAGCCATC 2997737
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | |||| ||||||||| |||||| ||||| || |||||||| || ||||| ||
Sbjct 2997736 AGACACTATTGAAAACGTGAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 2997677
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977
|| ||||||| | || || |||||| | |||||
Sbjct 2997676 GCAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGA 2997641
Score = 107 bits (118), Expect = 3e-18
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || | ||||||||||| || ||| | ||||| ||| ||||
Sbjct 3525926 ATGCAGATTTTTGTTAAGACCCTCACTGGAAAAACCATCACACTTGAAGTGGAACCTTCT 3525867
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || ||| |||||| || || ||||| || || || ||||| ||
Sbjct 3525866 GACACCATCGAGAATGTTAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3525807
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | ||||| | || || |||||| | |||||| | | ||| | ||||| ||||
Sbjct 3525806 CAGCGTTTGATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACTCTCTCAGACTATA-- 3525749
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032
||||||||| ||| | || ||||| || |||
Sbjct 3525748 ATATCCAAAAGGAGTCAACCCTTCACTTGGTG 3525717
Score = 105 bits (116), Expect = 1e-17
Identities = 121/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 155815 GTAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCG 155874
|||| |||||||| || || |||| || |||||||| ||||| |||||||| ||||| |
Sbjct 3528214 GTAACAAAATGCAGATTTTCGTTAAGACCTTGACTGGTAAAACCATTACATTGGAAGTTG 3528155
Query 155875 AAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTC 155934
|| ||||||| || |||||| ||| ||||| ||||| ||||||||||| || |
Sbjct 3528154 AACCCTCTGATACAATCGAAAACGTAAAAGCCAAAATCCAAGACAAAGAAGGCATTCCGC 3528095
Query 155935 CAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977
| || || || | |||| | || || || ||| | |||||
Sbjct 3528094 CTGATCAGCAGCGCCTGATCTTCGCTGGAAAACAGTTGGAAGA 3528052
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| ||||| | ||||| | ||||||||||| || ||| ||||||| ||| |||
Sbjct 3526154 ATGCAGATATTCGTCAAAACTCTCACTGGAAAAACCATCACACTAGAAGTAGAACCATCT 3526095
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || ||| |||||| || || ||||| || || || ||||| ||
Sbjct 3526094 GACACAATAGAAAATGTCAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3526035
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | ||||| | ||| || ||||| | |||||| | | || || || || |||||
Sbjct 3526034 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTATAAC 3525975
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| || ||| | || || ||| ||||
Sbjct 3525974 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3525946
Score = 93.3 bits (102), Expect = 6e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| ||||| | ||||| | ||||||||||| || ||| ||||||| ||| |||
Sbjct 3527294 ATGCAGATATTCGTCAAAACTCTCACTGGAAAAACCATCACACTAGAAGTAGAACCATCT 3527235
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || ||| |||||| || || ||||| || || || ||||| ||
Sbjct 3527234 GACACAATAGAAAATGTTAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAG 3527175
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | ||||| | ||| || ||||| | |||||| | | || || || || || ||
Sbjct 3527174 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCTTGTCTGACTACAAC 3527115
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| || ||| | || || ||| ||||
Sbjct 3527114 ATCCAGAAGGAGTCTACTCTCCATCTAGT 3527086
>seq1346
Length=947742
Score = 116 bits (128), Expect = 5e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470
||||||| | || | ||||| ||||| || | || || ||||| ||||||||||
Sbjct 446242 TTTCTTTCGGGTCCCTGATATATGTGTCAATAAGTAAGGAGTACATCTCAGAATGTACAT 446301
Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTAT 18530
|||||||||| ||||| || | |||||| ||||||| || | ||| | |||
Sbjct 446302 TTTCCATAGCAATCTGGAACCCATAAAAAAATCTAGCTTCTGTCACTTGGACCTCTTGTG 446361
Query 18531 AAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAA 18590
| ||||||||||| | || ||||| ||||| || || | | |||||||||||| | |
Sbjct 446362 AGAATCTTTCTACTAGGTTTTCATTGACTATTCCATCTGACGCTGCGAAAAATGCAAGCA 446421
Query 18591 CATATTTAATGAAATGT 18607
||| ||| |||||||||
Sbjct 446422 CATGTTTGATGAAATGT 446438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731805207531600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |