Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 120 9e-22
seq1234 118 3e-21
seq1327 109 2e-18
>seq1251
Length=5235866
Score = 120 bits (132), Expect = 9e-22
Identities = 618/974 (63%), Gaps = 25/974 (3%)
Strand=Plus/Minus
Query 155474 TGGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTAC 155530
||| || |||| ||||||||||| ||||||| ||| ||||| || ||| || ||
Sbjct 3095576 TGGATAGTAATTGACATCAATAATTTTATTTAGATTCTGGGTAAC---TATCTTTGTGAC 3095520
Query 155531 GTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAAT 155590
||| | ||| | ||| | ||||| || ||||| |||||||| | | ||||
Sbjct 3095519 CTCTTTAAGTTTGGTAAAGTTGTAAGTTTTGTCATCATTCACAAACATGTTCAAAGCAAT 3095460
Query 155591 AGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACAGC 155649
||| || | ||||| || || || || | || | | | || || ||||| || ||
Sbjct 3095459 AGATGCTAAGTTACAAACTGCTGTTTCATCTGCAGATG-TATACTCAACAATTTCTGTGC 3095401
Query 155650 ACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCAT 155709
||| ||| || || || ||||||| ||| ||||| ||| || || ||||| ||||
Sbjct 3095400 ACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCTGATTACTCTTCCTATTACAGGCAT 3095341
Query 155710 CCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT--CTTTAGCCA 155767
||||||||| || ||||| ||||| || || | ||||| || | ||| |||| |||
Sbjct 3095340 CCTTGTATAACATATATGGTGTTCCAGTTTCTACTTGTGCTTCAATAATAGCTTT--CCA 3095283
Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TTTCATATAC 155825
|| | || || | ||| || || | |||| ||||| ||||||| |
Sbjct 3095282 CAGTATCTGTGCTTTGACTTGTTTCACATAACGTTTTTCCTGTTCATATTTTTCATACAA 3095223
Query 155826 AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAAC 155885
||| | | || ||||| | ||||| | || || | | || ||||| |
Sbjct 3095222 AGCCT--CAAACTCTTCACCCCAGCAATCGGCTAAACCTGGAGAATCATGAGGGCACATA 3095165
Query 155886 AGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCA 155945
| |||| || ||| ||||| | |||||||| ||| ||| | |||
Sbjct 3095164 ATACTCCAATCTTCATTTTTTTCAACACGTTTCATAAATAAATCTGGAATCCACAGTGCA 3095105
Query 155946 TAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAAT 156005
|| || || || ||||| | ||||| | || |||||||| || |||| ||
Sbjct 3095104 TAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACCATGATTCTTTTTTAAATCTAGAAAC 3095045
Query 156006 TCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC---TCTTG 156062
|| ||||||| ||| || || | ||||| || ||| || || | |||
Sbjct 3095044 TCGAATATATCAGCATGCCAGGGTTCTAAATACACTGCGAAAGCGCCCGGCCGTTTATTG 3094985
Query 156063 CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCA 156122
|| || || || ||||| | ||||| |||||| | |||| | |||||| | ||||||
Sbjct 3094984 CCGCCTTGGTCCACATATCTGGCAGTGTTATTGTAAACACGCAACATAGGCACTATACCA 3094925
Query 156123 TTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGT 156182
|| || ||||| ||||| ||| | | || | | || || | |||
Sbjct 3094924 TTTGAGACACCATTTGTTCCAGCAATGTAGGTGCCTTTGGCTCTAATGCAGTGCACATGA 3094865
Query 156183 AGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATA 156242
| ||||||||||| | ||||||| || ||| || | || | ||| | | ||
Sbjct 3094864 ACACCAATACCACCAGCTGATTTAGAGATCAAAGCACACTGTTTCAAAGTGTCATATATC 3094805
Query 156243 CCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGT 156302
|| ||||| |||||| ||| | | ||| | || ||| || || |||| ||
Sbjct 3094804 CCCTCAATGCTGTCATCTCTCATAGCAACAAGAAAACATGAAGACAACTGTGGTCTAGGG 3094745
Query 156303 GTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCG 156362
|| |||| || || || || | |||||| | ||||| || | ||| | ||| |
Sbjct 3094744 GTGGCAGCAGCAAAAAGAGTTGGACTCGCATGAGTGAAATATTTCTCAGATAATAAATTG 3094685
Query 156363 TATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419
||||| || ||| | | |||| || || || || | |||||| || |||||
Sbjct 3094684 TATGT---CTGAATGGCGGCATCAACATCTTCACCATGTATTCCGATAGAAACTCTCATT 3094628
Query 156420 CACATATGCTGAGG 156433
|||||||||| ||
Sbjct 3094627 AACATATGCTGCGG 3094614
>seq1234
Length=7085824
Score = 118 bits (130), Expect = 3e-21
Identities = 225/326 (69%), Gaps = 4/326 (1%)
Strand=Plus/Minus
Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079
||| ||| | ||||||||||||||||| || ||||| | | |||||||| || || |
Sbjct 7064607 CCTCTTTCTGCCAACAGCATCAATTTCATCTATGAATAGAATACACGGAGCATGTTTACG 7064548
Query 289080 CGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAA 289139
|| || | ||| | || | || | ||| | || | |||||| |||| |||| ||
Sbjct 7064547 GGCCATCGAAAACATGTCACGCACTCTGGAAGGACCGACACCAACGAACATCTCTAAGAA 7064488
Query 289140 TTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAG 289199
|||||| | ||||| ||||| | ||||||||||| || ||| |||| | || ||
Sbjct 7064487 TTCAGATCCAGATACAGTTATGAAAGGAACATTTGCTTCTCCGGCTGTTGCCTTTGCTAG 7064428
Query 289200 AAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC 289259
||| || ||||| || ||||| ||||| || | | || ||||||| | | ||| | |
Sbjct 7064427 AAGCGTTTTACCAGTACCAGGCGGTCCTGTTAGCAAAGCT-CCTTTGGGAATCTTGGCTC 7064369
Query 289260 AGCAGAC-TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATT 289318
| | | | || | || || |||| | ||| | |||| ||| | ||| ||||
Sbjct 7064368 CGAGGTCAATGTACTGCTGTGGATTCTTCAGAAAGTTGACAAACTCCATTATTTC-TATT 7064310
Query 289319 TT-GCCTCATCACATCCTGCTACATC 289343
|| ||||| || || || ||||||||
Sbjct 7064309 TTGGCCTCTTCGCAGCCAGCTACATC 7064284
>seq1327
Length=2324893
Score = 109 bits (120), Expect = 2e-18
Identities = 222/330 (67%), Gaps = 0/330 (0%)
Strand=Plus/Minus
Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597
|||||| || || |||||| || ||||| |||||| ||| || ||||||||
Sbjct 1759171 ATTTCTCACTGTACCATCATAGTGAACCATAACAGACTCCATAGCCTTTATCAAACGACG 1759112
Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657
|||||| || |||||| | ||||||||||| |||||||| ||||| ||||||||||
Sbjct 1759111 CTGAATGTATCCAGTTTCGGCAGTTTTTACAGCAGTATCAATGAGACCCTCACGACCACC 1759052
Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717
||| || ||||| | | ||| ||| | || ||| | | || | || || ||
Sbjct 1759051 CATGGCGTGGAAATAAAATTCTGAAGGTGTCAATCCGGCAAGATATGAATTTTCTACAAA 1758992
Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777
||| | | || || || |||| ||| | || || || | || || || |
Sbjct 1758991 ACCTCTAGATTCTGGACCATAGTCGTCTTTGATGAAATGGGGTAATGTTCTCTTGCGGAA 1758932
Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837
|| |||| || |||||||| || ||||| || || || | || | ||| | ||| ||
Sbjct 1758931 TCCAAATGGAATTCGCTTTCCTTCTACGTTTTGTTGACCTACACAAGCAATAACCTGAGA 1758872
Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGC 302867
|||||| | || || ||||| |||||
Sbjct 1758871 AATATTAATATTGGATCCTTTGGAACCAGC 1758842
Score = 109 bits (120), Expect = 2e-18
Identities = 222/330 (67%), Gaps = 0/330 (0%)
Strand=Plus/Minus
Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597
|||||| || || |||||| || ||||| |||||| ||| || ||||||||
Sbjct 1759662 ATTTCTCACTGTACCATCATAGTGAACCATAACAGACTCCATAGCCTTTATCAAACGACG 1759603
Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657
|||||| || |||||| | ||||||||||| |||||||| ||||| ||||||||||
Sbjct 1759602 CTGAATGTATCCAGTTTCGGCAGTTTTTACAGCAGTATCAATGAGACCCTCACGACCACC 1759543
Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717
||| || ||||| | | ||| ||| | || ||| | | || | || || ||
Sbjct 1759542 CATGGCGTGGAAATAAAATTCTGAAGGTGTCAATCCGGCAAGATATGAATTTTCTACAAA 1759483
Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777
||| | | || || || |||| ||| | || || || | || || || |
Sbjct 1759482 ACCTCTAGATTCTGGACCATAGTCGTCTTTGATGAAATGGGGTAATGTTCTCTTGCGGAA 1759423
Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837
|| |||| || |||||||| || ||||| || || || | || | ||| | ||| ||
Sbjct 1759422 TCCAAATGGAATTCGCTTTCCTTCTACGTTTTGTTGACCTACACAAGCAATAACCTGAGA 1759363
Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGC 302867
|||||| | || || ||||| |||||
Sbjct 1759362 AATATTAATATTGGATCCTTTGGAACCAGC 1759333
Score = 98.7 bits (108), Expect = 3e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597
|||||| || || |||||| || ||||| |||||| ||| || ||||||||
Sbjct 1760683 ATTTCTCACTGTACCATCATAGTGAACCATAACAGACTCCATAGCCTTTATCAAACGACG 1760624
Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657
|||||| || |||||| | ||||||||||| |||||||| ||||| ||||||||||
Sbjct 1760623 CTGAATGTATCCAGTTTCGGCAGTTTTTACAGCAGTATCAATGAGACCCTCACGACCACC 1760564
Query 302658 CATAGCATGGAA 302669
||| || |||||
Sbjct 1760563 CATGGCGTGGAA 1760552
Score = 98.7 bits (108), Expect = 3e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597
|||||| || || |||||| || ||||| |||||| ||| || ||||||||
Sbjct 1815265 ATTTCTCACTGTACCATCATAGTGAACCATAACAGACTCCATAGCCTTTATCAAACGACG 1815206
Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657
|||||| || |||||| | ||||||||||| |||||||| ||||| ||||||||||
Sbjct 1815205 CTGAATGTATCCAGTTTCGGCAGTTTTTACAGCAGTATCAATGAGACCCTCACGACCACC 1815146
Query 302658 CATAGCATGGAA 302669
||| || |||||
Sbjct 1815145 CATGGCGTGGAA 1815134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471679920202437
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