Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1705 132 6e-25 seq1346 116 5e-20 >seq1705 Length=26149 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| ||| || || | ||||| ||||| | ||| | || || Sbjct 25017 GCTTGGCGAGCTCACCGGGCAGGAGAAGCCTCACGGAAGTCTGCACCTCCCTCGATGTGA 24958 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| | |||||| |||| ||||| ||| ||||||| | |||| || |||| | Sbjct 24957 TCGTTGACCTCTTGTTGTAGTGGGCCAGGCGGGAAGCCTCGGCGGCGATTCGCTCGAAGA 24898 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||||| |||| |||| || || ||| |||| Sbjct 24897 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGATATACCGGTGTCCGGGT 24838 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||| ||||| ||| Sbjct 24837 GCACCTGCTTCAGCACTTTGTAAATG 24812 >seq1346 Length=947742 Score = 116 bits (128), Expect = 5e-20 Identities = 149/203 (73%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 869195 ATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATG 869254 |||| ||| ||||| || | || || |||||||| || | |||||| ||||| |||||| Sbjct 445082 ATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTTCTTCAGCCAGAAGATG 445141 Query 869255 GCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCG 869314 | ||||||||||||||| |||||||| ||||| || ||||| | | | || || Sbjct 445142 GAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGCAAAAGCCACAATTCGTTCT 445201 Query 869315 GCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTC 869374 |||| ||| | || || || |||||||| || |||||||||||||| ||| || Sbjct 445202 CCAAATGTGGC-AG--TCTTGCTGGCGATCCACTGCAATGCCCAGTCGGCCTTCTTCTTC 445258 Query 869375 ACCGACGGCACCGTGTCGATGGC 869397 || | |||| || || ||||| Sbjct 445259 ACGCAGGGCAGGGTCTCAATGGC 445281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106540045749417