Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 109 9e-19
seq1196 100 4e-16
>seq1207
Length=6027761
Score = 109 bits (120), Expect = 9e-19
Identities = 162/227 (71%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090
||||||| ||| | || ||||| || |||||||| || || | || ||||| | || |
Sbjct 2998022 TGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCA- 2997964
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| ||||| ||||||| || |||||| ||| || ||||||||||| || || ||
Sbjct 2997963 GACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 2997904
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| || | || || ||||| || || || || || | ||| | | || || ||
Sbjct 2997903 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACGCTTTCCGACTACAAC 2997844
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
|| ||||| || || ||| | |||||||||||||| || ||||| ||
Sbjct 2997843 ATTCAAAAGGAGTCTACTCTACATTTAGTATTACGTTTGAGAGGTGG 2997797
Score = 102 bits (112), Expect = 1e-16
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090
||||||| ||| | || ||||| || |||||||| || || | || ||||| | || |
Sbjct 2996456 TGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCA- 2996398
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| ||||| ||||||| || |||||| ||| || ||||||||||| || || ||
Sbjct 2996397 GACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCTCCAGACCAG 2996338
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| || | || || ||||| || || || || ||| | ||| | | ||||| |||
Sbjct 2996337 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGATGGACGCACGCTTTCCGATTACAAT 2996278
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTA 146240
|| ||||| ||||| ||| | || || |||
Sbjct 2996277 ATTCAAAAGGAATCTACTCTTCACTTGGTA 2996248
Score = 87.8 bits (96), Expect = 3e-12
Identities = 114/155 (74%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090
||||||| ||| | || ||||| || |||||||| |||||| | || ||||| | || |
Sbjct 2997794 TGCAAATTTTCGTGAAGACATTGACGGGAAAAACTATTACTTTAGAAGTAGAGCCATCA- 2997736
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| |||||| |||| || || |||||| ||| || ||||||||||| || || ||
Sbjct 2997735 GACACTATTGAAAACGTGAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 2997676
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185
|| || | || || ||||| || || || || ||
Sbjct 2997675 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGA 2997641
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || || || || ||||| ||||| | || || |||| |
Sbjct 3528205 TGCAGATTTTCGTTAAGACCTTGACTGGTAAAACCATTACATTGGAAGTTGAACCCTCTG 3528146
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || |||| |||||| ||||| ||| |||||||||||||| || ||||| |
Sbjct 3528145 ATACAATCGAAAACGTAAAAGCCAAAATCCAAGACAAAGAAGGCATTCCGCCTGATCAGC 3528086
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || || || || || ||||| || || || | | || | | || || ||||
Sbjct 3528085 AGCGCCTGATCTTCGCTGGAAAACAGTTGGAAGACGGTCGCACCCTCTCCGACTACAATA 3528026
Query 146212 TACAAAAAGAATCGAC 146227
| ||||| ||||| ||
Sbjct 3528025 TTCAAAAGGAATCAAC 3528010
>seq1196
Length=1288689
Score = 100 bits (110), Expect = 4e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| |||||||| | || || || || || || |||| || ||| | |
Sbjct 730401 TGCAGATCTTCGTAAAAACACTTACGGGGAAGACCATCACCCTTGAGGTGGAAGCTTCTG 730342
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| ||| ||||| ||| ||| ||||| || || || || || |
Sbjct 730341 ACACCATCGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCTCCGGACCAGC 730282
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || || || |||||| | || ||| | || || |||| || ||||
Sbjct 730281 AGCGACTTATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACATTGTCAGACTACAATA 730222
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAAT 146266
| ||||| || || || | || || || || |||| ||||||||||| | |||
Sbjct 730221 TTCAAAAGGAGTCCACCTTGCACTTGGTGCTAAGATTGAGAGGAGGTAATTTAAT 730167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786094652488920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |