Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1193 91.5 2e-13 >seq1193 Length=4254175 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/166 (74%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 192952 ATTATCCACAAAAACCCCTTGTTACCACA-GAT-ATTGCAAAATTTAATAAATTAGACGA 193009 |||||||||| ||||| || || || ||| | | | || || |||| ||||| | Sbjct 1062457 ATTATCCACACAAACCACTGGTAACAACACGCTCAATGGAATATTTGCGGT-TTAGAGAA 1062515 Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069 || ||| ||||||||| | ||||| |||||| || || || || ||||||||||| Sbjct 1062516 CTA-CCAGCTGGTATTAACTCAATTGTAGCTATATTGTGTTACACAGGATATAATCAAGA 1062574 Query 193070 AGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTT 193115 ||||||| | ||||||||| | || || | ||||||||||| ||| Sbjct 1062575 AGACAGTGTCATTTTAAATGCATCTGCTGTAGAAAGAGGATTCTTT 1062620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635119632104280