Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq1282 102 3e-18
seq1185 102 3e-18
seq1395 100 9e-18
seq1215 100 9e-18
seq1466 98.7 3e-17
seq1168 98.7 3e-17
>seq1282
Length=2341812
Score = 102 bits (112), Expect = 3e-18
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 2290751 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 2290692
Query 2825 AACCCCGGGCTTCAGC 2840
|| |||||| ||| ||
Sbjct 2290691 AATCCCGGGTTTCGGC 2290676
>seq1185
Length=1193548
Score = 102 bits (112), Expect = 3e-18
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 592023 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 592082
Query 2825 AACCCCGGGCTTCAGC 2840
|| |||||| ||| ||
Sbjct 592083 AATCCCGGGTTTCGGC 592098
>seq1395
Length=265767
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 253301 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 253242
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 253241 ATCCCGGGTTTCGGC 253227
>seq1215
Length=170287
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 27384 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 27443
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 27444 ATCCCGGGTTTCGGC 27458
>seq1466
Length=621824
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 8499 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 8558
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 8559 CCGGGTTTCGGC 8570
>seq1168
Length=7897672
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 4214807 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 4214866
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 4214867 CCGGGTTTCGGC 4214878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848334335145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |