Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq1168 107 2e-18
seq1889 96.9 3e-15
seq1207 96.9 3e-15
>seq1168
Length=7897672
Score = 107 bits (118), Expect = 2e-18
Identities = 124/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 99911 GATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTAC 99970
|| ||||||| || || ||||| || || | || || ||||||||||||||||||
Sbjct 2386364 GACTGGCCGCGTAGCATGCCCCAAAAGCCGGAAGATTTAGCTGAAGCCGGTTTTTATTAC 2386423
Query 99971 ACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAA 100030
|||||| |||| ||||| ||| |||| | || ||||| ||||| ||||| ||||||
Sbjct 2386424 ACCGGCCAAGGCGACAAGACTAAGTGTTACTACTGTGACGGAGGCCTGAAAGATTGGGAA 2386483
Query 100031 AGCACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTG 100077
| ||| | |||||| | | ||||| ||||||||||| || ||
Sbjct 2386484 AAAGACGATGTACCGTGGGAGCAGCACGCTCGTTGGTTTGACCGTTG 2386530
Score = 98.7 bits (108), Expect = 8e-16
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 99587 ACATACGTCAACTGGCCTGTGTCTTTTTTGGAACCAAGTCAAATGGCCGCCAACGGGTTT 99646
|||| |||||| |||||||| | ||| | |||| || | || |||||| |||
Sbjct 2386025 ACATTCGTCAATTGGCCTGTCCCATTTCTATCACCACTAAAACTAGCTCGCAACGGTTTT 2386084
Query 99647 TATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAAATAATGCGC 99706
||||||||||| |||||||| | || || ||||| ||||| || || ||| |
Sbjct 2386085 TATTATTTGGGAAAAAATGACGAAGTTAGGTGTGCTTTTTGTAAAGTGGAGATTATGAGG 2386144
Query 99707 TGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAATGCCCG 99763
||| |||| |||||||| || || ||| ||| | || |||||||| |||||||||
Sbjct 2386145 TGGATGGAAGGCGACGATCCAGCCAAAGACCATCAGCGGTGGGCGCCACAATGCCCG 2386201
>seq1889
Length=140810
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/219 (70%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315
||||||||| || ||||| || |||||||| || ||||| |||||| ||||| ||| ||
Sbjct 27459 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 27518
Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375
||| || ||| | || ||| || ||| || ||||| || | || |||
Sbjct 27519 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 27578
Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGAT 106433
||| || | || || | || ||||| || || ||||| | | ||||| ||||
Sbjct 27579 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATC--CGAT 27636
Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472
||||| || || ||||||||||| || ||||| ||||||
Sbjct 27637 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTG 27675
>seq1207
Length=6027761
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/219 (70%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315
||||||||| || ||||| || |||||||| || ||||| |||||| ||||| ||| ||
Sbjct 2996689 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 2996630
Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375
||| || ||| | || ||| || ||| || ||||| || | || |||
Sbjct 2996629 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 2996570
Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGAT 106433
||| || | || || | || ||||| || || ||||| | | ||||| ||||
Sbjct 2996569 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATC--CGAT 2996512
Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472
||||| || || ||||||||||| || ||||| ||||||
Sbjct 2996511 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTG 2996473
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/219 (70%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315
||||||||| || ||||| || |||||||| || ||||| |||||| ||||| ||| ||
Sbjct 2998255 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 2998196
Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375
||| || ||| | || ||| || ||| || ||||| || | || |||
Sbjct 2998195 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 2998136
Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGAT 106433
||| || | || || | || ||||| || || ||||| | | ||||| ||||
Sbjct 2998135 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATC--CGAT 2998078
Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472
||||| || || ||||||||||| || ||||| ||||||
Sbjct 2998077 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTG 2998039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402293800335008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |