Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1705 131 2e-24
seq1346 113 6e-19
seq1220 91.5 2e-12
>seq1705
Length=26149
Score = 131 bits (144), Expect = 2e-24
Identities = 169/232 (73%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||| ||||| |||||||||||||| |||| | || |||| |||| |
Sbjct 24813 ATTTACAAAGTGCTGAAGCAGGTGCACCCGGACACCGGT-----ATA-TCCAGCAAGGCG 24866
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | |||||||
Sbjct 24867 ATGTCCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGAATCGCCGCCGAGGCTTCC 24926
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||| | || ||||||| | |||||| || | ||| | ||||| |||||
Sbjct 24927 CGCCTGGCCCACTACAACAAGAGGTCAACGATCACATCGAGGGAGGTGCAGACTTCCGTG 24986
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || || ||| ||| || || |||| |||||||||| || |||||||
Sbjct 24987 AGGCTTCTCCTGCCCGGTGAGCTCGCCAAGCACGCCGTCAGTGAAGGCACCA 25038
>seq1346
Length=947742
Score = 113 bits (124), Expect = 6e-19
Identities = 148/199 (74%), Gaps = 6/199 (3%)
Strand=Plus/Minus
Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155
||||| || || |||| | |||| ||| |||||||||||||| || |||||||| |
Sbjct 445281 GCCATTGAGACCCTGCCCTGCGTGAAGAAGAAGGCCGACTGGGCATTGCAGTGGATCGCC 445222
Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCT 1456214
| | | | | | ||| |||| || || | || | ||||| || ||||| |||||||
Sbjct 445221 A-GCAAGACTGCCACA-TTTGGAGAACGAATTGTGGCTTTTGCAGCAGTCGAAGGCATCT 445164
Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274
| ||||||||||||||| ||||||| ||||| |||||| | || |||||||| || |
Sbjct 445163 TCTTCTCGGGCAGTTTCGCTTCCATCTTCTGGCTGAAGAAGAGGGGGCTCATGCCTGGGC 445104
Query 1456275 TT-CTGCTTTAGCAACGAA 1456292
|| || || ||||| |||
Sbjct 445103 TTACT--TTCAGCAATGAA 445087
Score = 91.5 bits (100), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 1455855 TGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGC 1455914
|||| || |||| ||| ||| || ||||||||||| || || || || ||||| |||
Sbjct 446464 TGGGATTCACTGAAAGACTGCGAACGACATTTCATCAAACATGTGCTTGCATTTTT-CGC 446406
Query 1455915 CGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATT 1455974
|| ||||| || || || ||||| | | | || ||||||||||| |
Sbjct 446405 AGCGTCAGATGGAATAGTCAATGAAAACCTAGTAGAAAGATTCTCACAAGAGGTCCAAGT 446346
Query 1455975 GCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAAC 1456034
| |||| || | || ||||| ||||||||||| || || ||||| | || ||||| |
Sbjct 446345 GACAGAAGCTAGATTTTTTTATGGGTTCCAGATTGCTATGGAAAATGTACATTCTGAGAT 446286
Query 1456035 CTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
||||| | || || ||||| || ||| |||||||
Sbjct 446285 GTACTCCTTACTTATTGACACATATATCAGGGACCCG 446249
>seq1220
Length=2478420
Score = 91.5 bits (100), Expect = 2e-12
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 2133536 CGCCCTCTTTGACGAGGCGTCGGACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTC 2133595
|||| | |||||||| | | |||||||||||| |||| ||||| || | |||||
Sbjct 745770 CGCCATATTTGACGAAGACACAGACGAGATGGTGGTGGTGAAGGATATAGAGATGTTCTC 745829
Query 2133596 CATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGC 2133655
||||||||||||||| ||| | |||||| ||| |||| | | || ||||| ||
Sbjct 745830 CATGTGCGAGCACCATCTGGTACCCTTTTACGGGAAGGTATCCATTGGGTACCTTCCGCA 745889
Query 2133656 GGGCAAGATCATCGGTCTGAGCAAG 2133680
||||||||| | || || ||||||
Sbjct 745890 AGGCAAGATCTTGGGGCTCAGCAAG 745914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177107005130762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |