Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 114 1e-20
seq1196 104 2e-17
seq1889 96.9 3e-15
>seq1207
Length=6027761
Score = 114 bits (126), Expect = 1e-20
Identities = 168/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 35503 TTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTA 35562
|| |||||||||||| | | | ||||| || || || || ||||| ||||||||
Sbjct 3525237 TTAATTTCCACCACGAAGACGGAGTACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTA 3525296
Query 35563 ATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622
||| | | ||| || |||| |||| || ||||| || || |||| ||||| |||||
Sbjct 3525297 ATCAGAGAGGGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAGATCAGACGCTGTTGGTC 3525356
Query 35623 CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCG 35681
| ||| | | |||||||||| ||| ||| || || | | || | | ||||| |
Sbjct 3525357 TGGAGGGATACCCTCCTTGTCC-TGAATTTTGGCTTTAACATTTTCAATTGTGTCAGATG 3525415
Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || | || || |||||||| || |||||||||||||||||||||||
Sbjct 3525416 GCTCAACTTCTAAAGTTATAGTTTTACCAGTTAAAGTTTTCACAAATATCTGCAT 3525470
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | || | || || ||||||| ||| |||||||||||||||||| ||||
Sbjct 2997795 TTCCACCTCTCAAACGTAATACTAAATGTAGAGTAGACTCCTTTTGAATGTTGTAGTCGG 2997854
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || |||| |||| |||||| || || || ||||| ||||||||||| | |
Sbjct 2997855 AAAGCGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGG 2997914
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| || ||||||| | ||| ||| | ||| | | || | | ||||| | ||
Sbjct 2997915 GAATGCCTTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCT 2997973
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || | ||||| ||||| || ||||| || || || || || |||||
Sbjct 2997974 ACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2998023
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | |||||| || | || |||| ||||| || |||||
Sbjct 3527103 CTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAA 3527162
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
||||| ||||||||||| | |||| | ||| |||||| ||| ||| || || | |
Sbjct 3527163 GATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC-TGAATTTTAGCTTTAACAT 3527221
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| | ||| || || | ||||| ||||| || || | |||||| |
Sbjct 3527222 TTTCTATTGTGTCAGATGGTTCTACTTCTAGTGTGATGGTTTTTCCAGTGAGAGTTTTGA 3527281
Query 35724 CAAATATCTGCAT 35736
| |||||||||||
Sbjct 3527282 CGAATATCTGCAT 3527294
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||||||||| | | || ||||| || | ||| ||||||||||| ||||||||||
Sbjct 2996230 TCCACCACGAAGACGCAGTACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCGGA 2996289
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
| || || | || |||| |||||| || || || ||||| ||||||||||| | |||
Sbjct 2996290 AAGCGTGCGTCCATCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGAGG 2996349
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
|| || ||||||| | ||| ||| | ||| | | || | | ||||| | || |
Sbjct 2996350 AATGCCTTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCTA 2996408
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || | ||||| ||||| || ||||| || || || || || |||||
Sbjct 2996409 CTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2996457
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || || | |||||| || | || |||| ||||| || |||||
Sbjct 3525963 CTCCTTCTGGATGTTATAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAA 3526022
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
||||| ||||||||||| | |||| | ||| |||||| ||| ||| || || | |
Sbjct 3526023 GATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC-TGAATTTTAGCTTTGACAT 3526081
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| | ||| || || | ||||| ||||| || || | |||||| |
Sbjct 3526082 TTTCTATTGTGTCAGATGGTTCTACTTCTAGTGTGATGGTTTTTCCAGTGAGAGTTTTGA 3526141
Query 35724 CAAATATCTGCAT 35736
| |||||||||||
Sbjct 3526142 CGAATATCTGCAT 3526154
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | |||||| || | || |||| ||||| || |||||
Sbjct 3527787 CTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAA 3527846
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
||||| ||||||||||| | |||| | ||| |||||| ||| |||||| || | |
Sbjct 3527847 GATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC-TGAATTTTTGCTTTGACAT 3527905
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
| | | ||||| | ||||| || | ||||| ||||| || || | |||||| |
Sbjct 3527906 TCTCAATGGTGTCTGAAGGCTCCACTTCAAGTGTGATGGTTTTCCCAGTGAGAGTTTTTA 3527965
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 3527966 CGAAGATCTGCAT 3527978
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||| |||||||| | ||| || || ||||| ||||||||||
Sbjct 2996459 CCACCACGGAGGCGCAATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGAT 2996518
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||| |||||| || || || |||| |||||||| || | |||
Sbjct 2996519 AGTGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGG 2996578
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| || || ||||| || | | || | | || || | || ||
Sbjct 2996579 ATTCCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCTACT 2996638
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|||| || || || ||||||||||| || |||||||| |||||||||
Sbjct 2996639 TCCAAGGTAATAGTCTTACCCGTCAATGTCTTCACAAAGATCTGCATT 2996686
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||| |||||||| | ||| || || ||||| ||||||||||
Sbjct 2998025 CCACCACGGAGGCGCAATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGAT 2998084
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||| |||||| || || || |||| |||||||| || | |||
Sbjct 2998085 AGTGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGG 2998144
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| || || ||||| || | | || | | || || | || ||
Sbjct 2998145 ATTCCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCTACT 2998204
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|||| || || || ||||||||||| || |||||||| |||||||||
Sbjct 2998205 TCCAAGGTAATAGTCTTACCCGTCAATGTCTTCACAAAGATCTGCATT 2998252
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| || | || |||||| || | || ||||||||| || || || || |
Sbjct 3525700 CCACCACGCAAGCGCAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTATAGTCTGAG 3525759
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || |||| |||||| || || || ||||| ||||||||||| | |||
Sbjct 3525760 AGAGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGGGGA 3525819
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||| |||||| ||| ||| || || | | | | | ||||| | ||||||
Sbjct 3525820 ATTCCCTCTTTGTCC-TGAATTTTAGCTTTAACATTCTCGATGGTGTCAGAAGGTTCCAC 3525878
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| ||||| || || | || || ||||| ||||||||
Sbjct 3525879 TTCAAGTGTGATGGTTTTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 3525926
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || |||||| || | || ||||||||||| ||||| ||||
Sbjct 3527980 CCACCACGGAGACGCAGCACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAGTCGGAG 3528039
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| |||| ||| || || || || |||| |||||||| || | |||
Sbjct 3528040 AGGGTGCGACCGTCTTCCAACTGTTTTCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGA 3528099
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || || ||||| ||| ||| || || | || | | || || | ||| ||
Sbjct 3528100 ATGCCTTCTTTGTCTTGGAT-TTTGGCTTTTACGTTTTCGATTGTATCAGAGGGTTCAAC 3528158
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741
|||| || || |||||||| ||||| || || || || ||||||||| |||
Sbjct 3528159 TTCCAATGTAATGGTTTTACCAGTCAAGGTCTTAACGAAAATCTGCATTTTGT 3528211
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||||||||| || | || |||||||| ||||| || || |
Sbjct 3526156 CCACCACGCAGACGCAACACCAAGTGAAGGGTTGATTCCTTTTGGATGTTATAGTCTGAG 3526215
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || |||| |||||| || ||||| ||||| ||||||||||| | |||
Sbjct 3526216 AGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGA 3526275
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| || ||| ||||| || | | | | | ||||| | || ||
Sbjct 3526276 ATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTCTCAATGGTGTCAGAAGGCTCAACT 3526335
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| ||||| || || | |||||| || || ||||||||
Sbjct 3526336 TCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCAT 3526382
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||||||||| || | || ||||| || ||||| || || |
Sbjct 3527296 CCACCACGCAGACGCAACACCAAGTGAAGAGTCGATTCCTTCTGGATGTTATAGTCTGAG 3527355
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || |||| |||||| || ||||| ||||| ||||||||||| | |||
Sbjct 3527356 AGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGA 3527415
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| || ||| ||||| || | | || | | ||||| | || ||
Sbjct 3527416 ATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGAAGGCTCAACT 3527475
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| ||||| || || | |||||| || || ||||||||
Sbjct 3527476 TCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCAT 3527522
>seq1196
Length=1288689
Score = 104 bits (114), Expect = 2e-17
Identities = 168/239 (70%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565
||| || || | || || | |||||| || || || |||||||||||| ||||| ||
Sbjct 730172 ATTACCTCCTCTCAATCTTAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTC 730231
Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625
| ||| || || | || ||||| || || || || || || | |||||||||||||
Sbjct 730232 TGACAATGTGCGGCCATCTTCCAGTTGTTTGCCAGCGAAGATAAGTCGCTGCTGGTCCGG 730291
Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATT 35684
||| | | ||||| | | ||| ||| || |||| | || | | ||||| | ||
Sbjct 730292 AGGGATACCTTCCTTAT-CTTGAATTTTGGCTTTCACATTTTCGATGGTGTCAGAAGCTT 730350
Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGC 35743
||||||| | ||||| || || ||||| | ||||| || || ||||||||| || ||
Sbjct 730351 CCACCTCAAGGGTGATGGTCTTCCCCGTAAGTGTTTTTACGAAGATCTGCATTGTGAGC 730409
>seq1889
Length=140810
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||| |||||||| | ||| || || ||||| ||||||||||
Sbjct 27689 CCACCACGGAGGCGCAATACCAAATGAAGGGTAGATTCTTTCTGAATATTGTAATCGGAT 27630
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||| |||||| || || || |||| |||||||| || | |||
Sbjct 27629 AGTGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAGTCGCTGCTGATCAGGAGGG 27570
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| || || ||||| || | | || | | || || | || ||
Sbjct 27569 ATTCCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCTACT 27510
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|||| || || || ||||||||||| || |||||||| |||||||||
Sbjct 27509 TCCAAGGTAATAGTCTTACCCGTCAATGTCTTCACAAAGATCTGCATT 27462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450752459449080
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