Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 666 0.0
seq1346 116 5e-21
>seq1251
Length=5235866
Score = 666 bits (738), Expect = 0.0
Identities = 1232/1780 (69%), Gaps = 38/1780 (2%)
Strand=Plus/Minus
Query 68364 CTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423
|||||||| |||||| ||||| | || || || ||||| |||||||| ||||| ||
Sbjct 3096377 CTTATCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATAATACATTCC 3096318
Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483
||||| ||||| | |||| | || || || ||| |||||||| |||| ||||
Sbjct 3096317 AGTTTTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCCATAATTTGG 3096258
Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543
|| |||| ||| ||||| | || || |||||||| ||||| || ||||| ||||||||
Sbjct 3096257 CTCAGCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCTGTCTGCCGC 3096198
Query 68544 CATTTTTATAATACTCTTTTGA--GGAATTTCCCAAATAGTCTT--AAAAATCTGTTTGA 68599
||||| || || | ||||| | ||| ||||||| ||| || | || ||| || |
Sbjct 3096197 CATTTGAATGGTAGT--TTTGACTGAAATCTCCCAAACAGTTTTGTACAAGTCTCTT--A 3096142
Query 68600 TATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCT 68656
|||| | |||| | | |||||||||| |||||| || ||||| | ||| |
Sbjct 3096141 TATCTTTGGGAATGGTTTCAATATTTTGAATTGATCCATTATTATGAATAATGAGATTTT 3096082
Query 68657 TGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTA 68716
| || || |||| ||| | | || |||||| | | | | || |||| || |
Sbjct 3096081 TCATATCTTCATCCCATAGCTCAGCTTCTGTTAAATCACGCAATAAGTGATGATTGACAA 3096022
Query 68717 TTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAG 68776
||| ||||| || ||||| || | | |||||||||| || | || || | ||
Sbjct 3096021 CTTGGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGCTCAAAAG 3095962
Query 68777 ATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAAC 68836
||||||| ||||| || ||||| || ||||| ||||| |||||||| || || | ||
Sbjct 3095961 ATTCATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACTAGTAGTG 3095902
Query 68837 TATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTT-CCAATCCCAAAGATCA 68895
||| | ||| |||||| || ||||| ||||| | ||| | ||| ||||| || ||
Sbjct 3095901 AATTGCGAAGTCCATGTTTTGCAATTTTGTCTTTCA-ATGCCTGCCAGTCCCAGAGGTCT 3095843
Query 68896 GATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTA 68955
| ||| ||||| | || ||||||| || || | ||| || |||| |
Sbjct 3095842 GTTGGAGTTTTGTTCCACATCTCATATTGTAATATCCCCTGACTGACAGGACTACCATGA 3095783
Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015
||||| ||||| || | | ||| || | |||||||||||||||||| || ||||||
Sbjct 3095782 TATGTCTCATACACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAA 3095723
Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075
||||| ||||| || || | | || || | || | ||| || |||| |
Sbjct 3095722 TAAATAGTTTCAAATATTTGTTGGTTCAGTTTGATAGCAGTTTCACTTTCATATGGT--A 3095665
Query 69076 TGTAAAAGAATA--AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTC 69133
|| | |||| |||| |||||| ||||| || || || || || |||||||| || |
Sbjct 3095664 TGCGCATTAATACAAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCC 3095605
Query 69134 TCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAA 69193
|| ||||||| ||| ||||| || | ||||| ||||| | ||| ||||||||||| |
Sbjct 3095604 TCATATTTGATTTTTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTA 3095545
Query 69194 GATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC--AAATCGTC-CAT 69250
|||| || |||| || || || || |||||| ||| | || | | |||
Sbjct 3095544 GATTCTGGGTAACTATCTTTGTGACCTCTTTAAGTTTGGTAAAGTTGTAAGTTTTGTCAT 3095485
Query 69251 CTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAAT 69310
| | |||||||| |||| || | |||||||| |||||||||||| |||| | |
Sbjct 3095484 CATTCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCAG 3095425
Query 69311 TTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCT 69370
|| ||| | | || ||||| || | || |||||||| || || || ||||||| ||
Sbjct 3095424 ATGTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCT 3095365
Query 69371 GATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCT 69430
|||||||||| | |||||||| |||||||| | ||| | || || |||||||| | |
Sbjct 3095364 GATTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTACTT 3095305
Query 69431 GAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCT 69490
| | ||| ||||||| |||||| | | | || || | | || ||||| || |
Sbjct 3095304 GTGCTTCAATAATAGCTTTCCACAGTATCTGTGCTTTGACTTGTTTCACATAACGTTTTT 3095245
Query 69491 CTTTTTCATATTGTGTATATA--GCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548
| | |||||||| | ||| | ||| || || || || ||||| ||| | || ||
Sbjct 3095244 CCTGTTCATATTTTTCATACAAAGCC--TCAAACTCTTCACCCCAGCAATCGGCTAAACC 3095187
Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT---AACTCGTTTCAT 69605
||| | |||| || ||||| ||| || || ||| |||| || ||| ||||||||
Sbjct 3095186 TGGAGAATCATGAGGGCACAT-AAT-ACTCCA-ATCTTCATTTTTTTCAACACGTTTCAT 3095130
Query 69606 AAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCC 69665
||||| ||| |||||||| || || |||||| ||||| | | ||| || || ||
Sbjct 3095129 AAATAAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACC 3095070
Query 69666 TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 69725
||| ||||| | ||| |||||||| | ||||||| |||||| ||||||| ||| |
Sbjct 3095069 ATGATTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACAC 3095010
Query 69726 CGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATA 69785
|| | | ||||| |||||||| || || || || | ||||||||||||||||| ||
Sbjct 3095009 TGCGAAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGTA 3094950
Query 69786 GACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCC 69845
|| | || ||| || | |||||||| || |||||||||||||| ||| || | ||
Sbjct 3094949 AACACGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGCC 3094890
Query 69846 TCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGA 69903
| | || | ||| | | | || || | ||| || || || || ||||||||| | |
Sbjct 3094889 TTTGGCTCTAATGCAGTGCACAT-GA-ACACCAATACCACCAGCTGATTTAGAGATCAAA 3094832
Query 69904 GCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGA 69963
||||| ||||||| ||||||||||| ||||| ||||| |||||| |||| || ||||
Sbjct 3094831 GCACACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAGA 3094772
Query 69964 AAACAGCTAGACATTTGATGATGTA-TAGTTCCCGCATTAAATAATGTAGGAGATGCGTG 70022
||||| ||||| || || | || || | ||| ||| | || ||| || ||
Sbjct 3094771 AAACATGAAGACAACTG-TGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATG 3094713
Query 70023 AGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACT 70081
|||||| |||| ||||| | | ||||||||| | ||| || | || | ||| |||
Sbjct 3094712 AGTGAAATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCAC- 3094654
Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGG 70121
||| ||||| || | || | ||| ||||||||||| ||
Sbjct 3094653 CATGTATTCCGATAGAAACTCTCATTAACATATGCTGCGG 3094614
>seq1346
Length=947742
Score = 116 bits (128), Expect = 5e-21
Identities = 161/223 (72%), Gaps = 3/223 (1%)
Strand=Plus/Plus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
||||||||||| ||| | ||| || || || || |||||||| || || | ||| |
Sbjct 445068 CCTCATCTCTAGAAATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTTCT 445127
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| ||||| || |||| ||| ||| || || |||||||||||||| ||||||||||| |
Sbjct 445128 TCAGCCAGAAGATGGAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGCAAAAG 445187
Query 39759 CAACAAGTCTCTCTCCGTAACTTGTA-TCATTATG--TATCCACTTCTGTGCCCAATCAG 39815
| |||| || ||||| | | | | || | || ||||||| | |||||| || |
Sbjct 445188 CCACAATTCGTTCTCCAAATGTGGCAGTCTTGCTGGCGATCCACTGCAATGCCCAGTCGG 445247
Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858
| |||||||| || || |||| || || || ||||| || ||
Sbjct 445248 CCTTCTTCTTCACGCAGGGCAGGGTCTCAATGGCATTGAACAG 445290
Score = 102 bits (112), Expect = 1e-16
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 39908 TACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 39967
||||| || ||||| | ||||| || || ||||| || || |||||| |||| |||||
Sbjct 446283 TACATCTCAGAATGTACATTTTCCATAGCAATCTGGAACCCATAAAAAAATCTAGCTTCT 446342
Query 39968 GTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTA 40027
|| | ||| |||||| | |||||||| | | |||||||| |||||||||||
Sbjct 446343 GTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGGTTTTCATTGACTATTCCATCTGAC 446402
Query 40028 GCGGCAAAAAATGCCAATACATGTTTAATAAAAT 40061
|| || |||||||| | |||||||| || ||||
Sbjct 446403 GCTGCGAAAAATGCAAGCACATGTTTGATGAAAT 446436
Score = 89.7 bits (98), Expect = 7e-13
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
||||||| ||| |||||||| | |||||||| || ||||||||||| || ||||| |||
Sbjct 446683 TTTGATAAATCCACTTCTTCCACCGTCCAAAATGATGCCTCTGCCTTCTTATACATTTTC 446742
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATC 40199
||||| || |||| || || || || || |||||||
Sbjct 446743 CATATGTCGGGATACTGAATGGGGAATATTACAAATC 446779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686846110985640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |