Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1346 82.4 6e-11 >seq1346 Length=947742 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 43856 GCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA 43915 || ||||| || ||| || || |||||||||||||| | || | || | ||| Sbjct 446416 GCATTTTTCGCAGCGTCAGATGGAATAGTCAATGAAAACCTAGTAGAAAGATTCTCACAA 446357 Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 || || ||| | ||||||| ||| |||||||||||| || ||||| || |||||| | Sbjct 446356 GAGGTCCAAGTGACAGAAGCTAGATTTTTTTATGGGTTCCAGATTGCTATGGAAAATGTA 446297 Query 43976 CATTCGGAAATGTAC 43990 ||||| || |||||| Sbjct 446296 CATTCTGAGATGTAC 446282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397420633992505